Novosphingobium olei: NSDW_33560
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Entry
NSDW_33560 CDS
T09939
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_33560
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NSDW_33560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
ResIII
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_22
AAA_16
AAA_30
Hydrolase
TrwB_AAD_bind
T2SSE
CbiA
AAA_19
nSTAND_NTPase5
AAA_7
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
BEV02262
LinkDB
All DBs
Position
3589990..3591564
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AA seq
524 aa
AA seq
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MGEIVIGLGADGQQQVLRLDRANRHGLVAGATGTGKTVTLQGIAEQFSRAGVPVFLADVK
GDLSGISMPGSPTFKNADKLEARAKEVGIADYAYADNPSVFWDLYGEAGHPIRTTISEMG
PVLLARLLGLNETQEGVLNIAFRYADDNGLLLIDLADLQSVLVACAEAASELATKYGNVS
KASVGTIQRQLLAFESQGADRFFGEPAFEINDFLKLDDQGRGMVNVLAAEKLMQSPKLYA
TFLLWLLSELFEALPEVGDPEKPSLVFFFDEAHLLFDDAPQALFDKVEQVVRLIRSKGVG
VYFVTQNPIDIPEKIAGQLGNRVQHALRAFTPRDQKAIRAAAETFRINPDLDVEKVITEL
KVGEALVSTLDADGAPGVVQRTLVAPPRSRLGPVTPKERAVIQSVSPFDGKYDTAVNRES
AAEVLAQKAADAAAAAKQVEEQGEVAQRGAARQSPSLWGKAGKAAVGAVASSAGAVIAAE
IMGKKSRASPVSSGLTAVVGTVATQIGGAAFGRFARGLLGGLLR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagatcgtgatcgggctgggcgcggacggacagcagcaggtgctgcggctcgat
cgggcgaaccgccacgggctggtggcgggcgcaaccggcacgggcaagacggtgacgttg
cagggcatcgccgaacagttcagccgcgccggcgtgccggtgttcctggccgacgtgaag
ggcgatctatccggcatctcgatgcccggcagccccaccttcaagaacgccgacaagctg
gaggcgcgggccaaggaagtcggcatcgccgactacgcctatgctgataacccgtcggtg
ttctgggacctttatggcgaagccggccacccgatccgcacgaccatttcggaaatgggc
ccggtgctgctcgcccgcctgctcggcctcaacgaaacgcaggaaggcgtgctcaacatc
gccttccgctatgccgatgataacggactgctgctgatcgaccttgccgacctgcaatcg
gtgctggtcgcctgcgccgaagcggcaagcgagttggcgacgaaatacggcaacgtatcc
aaggccagcgtcggcacgatccagcgccagctgctcgccttcgaaagccagggcgcggac
cgcttctttggcgaacccgcgttcgagatcaacgacttcctcaagctcgacgaccagggg
cgcggcatggtcaacgtgctcgccgccgaaaagctgatgcagagccccaagctctacgcc
acgttcctgctctggctgctgtccgaactgttcgaggcgctgcccgaagtcggcgatccc
gaaaagccaagcctcgtgttcttcttcgatgaagcacacctgctgttcgacgatgccccg
caggcgctgttcgacaaggtcgagcaggtcgtccgcctgatccggtcgaagggcgtgggc
gtctacttcgtcacgcagaacccgatcgacattcccgaaaagatcgcagggcaactcggc
aaccgcgtgcagcatgccctgcgcgcgttcaccccgcgcgaccagaaggcgatccgcgcg
gcagcggaaaccttccgcatcaatcccgatctcgatgtcgaaaaggtgatcaccgagctg
aaggtgggcgaagcgctcgtttccacgctcgatgccgatggcgcgccgggcgtggtccag
cgcacgctggtggcgccgccgcgttcgcggcttggcccggtcacgcccaaggagcgtgcg
gtgatccagtcggtcagcccgttcgacggcaagtacgacaccgccgtcaaccgcgaaagc
gccgccgaagtgctggcgcagaaggcggccgatgcagcggcggcggcgaagcaggtggaa
gaacagggcgaagtcgcccagcgcggtgccgcgcgccagagccccagcctgtggggcaag
gcgggcaaggccgccgtcggcgcggtggcaagctcggcaggcgcggtgatcgcggccgag
atcatgggcaagaaatcgcgcgcctcgccggtgtcctcgggccttaccgcggtggtcggc
acggtcgccacgcagatcggcggcgccgccttcggccgcttcgcgcgcgggctgctcggc
ggcttgctgcggtag
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