Novosphingobium olei: NSDW_35670
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Entry
NSDW_35670 CDS
T09939
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nol
Novosphingobium olei
Pathway
nol03030
DNA replication
nol03410
Base excision repair
nol03420
Nucleotide excision repair
nol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSDW_35670 (polA)
03410 Base excision repair
NSDW_35670 (polA)
03420 Nucleotide excision repair
NSDW_35670 (polA)
03440 Homologous recombination
NSDW_35670 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nol03032
]
NSDW_35670 (polA)
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_35670 (polA)
Enzymes [BR:
nol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSDW_35670 (polA)
DNA replication proteins [BR:
nol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NSDW_35670 (polA)
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NSDW_35670 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NSDW_35670 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DprA_N
HAMP_N3
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BEV02473
LinkDB
All DBs
Position
complement(3812041..3814935)
Genome browser
AA seq
964 aa
AA seq
DB search
MDTAVDLTPKAATNAQHRHLYLVDGSAYIFRAYHRLPPLTNPKGVPVGAVYGYTTMLWKL
AEDLHKADGPTHLAVILDKGSTTFRNALYDQYKANRPPPPEDLVPQFPLIRDATRAFSLA
CIEEDDLEADDLIASYARAATARGWDVTIVSSDKDLMQLVGKCATGGGCVDMLDTMKNQR
IDIPEVIEKFGVPPEKVGDVLALMGDAVDNVPGIRGIGPKTATKLIQEHGDLEAALAAAP
AMKPSKLRDSLIEQADMARLSRVLVALKEDCDLPIPIEDFELKAIPPDPLAAFLSEHGFT
SLLRKLGTAAPAPAPAPADTSTASHASPASSATEGASRQSLPAWPEIDLGSYACVQSMDE
LERWIGRAFDARIVAIDTETSALDSMRAELVGVSLALGPNDACYIPLGHGGSDMFSERPE
QIDRLAALRALKPLLESDAVLKVGQNVKYDITILARAGEAVGGLAVAPVDDTMVMSFCLD
AGRSETGLAGHGMDELAERHLGHGTMKFKDLCGTGKKAITFAEVPLADATRYAAEDADVT
WRLHRLFGPRLSDEGGTRIYQTVDRPLVPVVAQMERHGIRVDRDRLAALSSEFAGKIGEL
EAVIYDKCGGAFTIGSPKQLGEVLFDKLGYKGGKKGKSGQYSTDQSVLETLAGQGAEVAT
LVLEWRQLSKLKSTYTDALQAAINPATGRVHTSYSLVGAQTGRLSSNEPNLQNIPIRTEI
GRQIRDAFVAEPGNVLLAADYSQIELRLAAHMADVPALKDAFAAGEDIHARTAMEMFGAV
DRDTRGRAKTINFAILYGISRWGLAGRLGTSADEAQAMIDRYFERFPGIQRYIHDTLEQV
RERGYSETLFGRKTWFPRINSKNQAERQGSERAAINAPIQGTCADIIKRAMVRMMPALQT
AGLGHVRMLLQVHDELVFELPEGDIERARPVIEDVMARAAEPAIALTVPLGVEIGTGPSW
GAAH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggacacagccgtcgatcttacgcccaaagccgcaaccaatgcccagcaccgacacttg
tacctggtcgacgggtccgcgtacattttccgcgcctaccaccgcctgcccccgctgacg
aaccccaagggagtgccggtcggcgccgtctacggttatacgacaatgctctggaagctg
gcggaggatctgcacaaggccgatggcccgacccaccttgccgtcatcctcgacaagggt
tccaccactttccgaaacgcactgtacgaccagtacaaggccaaccggccgccgccgccc
gaggacctggttccgcagttcccgctgatccgtgatgccacgcgtgcgttcagccttgcg
tgcatcgaagaggatgacctggaagccgacgatctaatcgcatcctacgcgcgagcggcg
acagcacgcggctgggacgtgacgatcgtctcgtccgacaaggatctgatgcagctcgtc
ggcaagtgcgcaacgggcggtggctgtgtcgacatgctcgatacgatgaagaaccagcga
atcgacatccccgaagtgatcgagaagttcggcgtgccccccgaaaaggtaggcgacgtc
ctcgcgctgatgggcgatgcggtcgacaatgtgcccggcatccgcggcatcggcccgaaa
acggcaaccaagctcatccaggagcatggcgaccttgaggcggcactggccgctgccccg
gcgatgaagccgagcaagctgcgcgacagcctgatcgagcaggcagacatggcccgcctt
tcgcgcgtgcttgtcgcgctcaaggaagattgcgaccttcccatcccgatcgaagacttc
gaactgaaggcaattccgcccgatccgctcgcggcgttcctcagcgagcacgggttcacc
agcctgctgcgcaagctcgggaccgcagcgccagcaccagcaccagcgcctgctgacacg
tctacggcttcccacgccagccctgcctcaagtgcgaccgaaggtgccagccgccagtcc
ctgcccgcatggcccgaaatcgaccttggcagctatgcctgcgtccagtcgatggacgaa
ctcgaacgatggatcggccgtgccttcgacgcccggatcgtcgccatcgacacggaaacg
agcgcacttgattcgatgcgggcagaactggtcggggtgagccttgcgctcggccccaat
gatgcctgctacattccgctcggccacggtggcagcgacatgttttccgaaaggccggag
cagatcgaccggcttgcagcattgcgtgcactcaagccgcttctcgaaagcgacgcagtg
ctcaaggtcgggcagaacgtgaaatacgacatcaccatcctggcgcgcgcgggcgaagcg
gttggcgggctggccgtcgcgcccgtcgacgatacgatggtgatgagcttctgcctcgat
gcaggccgcagcgaaaccgggcttgcagggcacggcatggacgaactggccgaaaggcac
ctcggccacggcaccatgaagttcaaggatttgtgcggcaccggcaagaaggccatcacg
ttcgccgaagtacccttggccgacgctactcgctatgccgccgaggacgccgacgtgacc
tggcgtctgcaccggctgtttggcccccgcctctccgacgaaggagggacgcgaatctac
cagaccgtcgatcggccgctcgtacccgtggttgcccagatggagcggcacggcatccgc
gtcgatcgcgatcgactggccgccctgtcatccgaattcgccggaaagatcggtgaactc
gaagcggtgatctacgacaagtgcggcggcgcattcacgatcggaagccccaagcaactt
ggcgaggtcctgttcgacaagcttggctacaagggcggcaagaagggcaagagcggtcag
tactctaccgaccagtcggtgcttgaaactctggcgggccaaggggccgaggtcgccacg
ctcgtgctggaatggcgccagctgtccaagctgaagtctacctataccgatgccctgcag
gcggcgatcaaccctgctacgggtcgggtccataccagctacagcctcgtcggcgcgcag
acgggccgcctgtcgtcgaacgagcccaacctgcagaacatcccgatccgcaccgagatc
ggccggcagattcgcgatgcctttgttgcagagccgggcaatgtcctgctggccgcggac
tacagccagatcgagctacgcctggctgcgcacatggcggacgtgcccgcgctgaaggac
gcgtttgcagccggcgaggacattcacgcgcgcactgcgatggagatgttcggcgccgtc
gaccgtgacacgcgcggccgcgccaagacgatcaacttcgccatcctgtatggtatcagc
cgctggggccttgccgggcggctgggcaccagcgcggatgaagcgcaggcgatgatcgac
cgctacttcgagcgcttccccgggatccagcgctacatccacgacacgctggagcaggtg
cgcgagcgcggctattccgagaccctgttcggccgcaagacgtggtttccccgcatcaat
tcaaagaatcaggcggaacggcagggcagcgagcgcgctgcgatcaacgcccccatccag
ggaacctgtgccgatatcatcaaacgggccatggtgcggatgatgccagcgctccagacg
gcgggccttggtcacgtgcgcatgctactgcaggtgcacgacgagctcgttttcgagctt
ccggagggtgacatcgagcgggcacgaccggtgatcgaagacgtgatggcccgcgcagcg
gagccagcgatcgcgctaaccgttccccttggcgtcgagatcggcaccgggccatcctgg
ggggcagcgcactga
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