Nonlabens sp. MIC269: AAT17_00830
Help
Entry
AAT17_00830 CDS
T04144
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nom
Nonlabens sp. MIC269
Pathway
nom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT17_00830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nom03019
]
AAT17_00830
03400 DNA repair and recombination proteins [BR:
nom03400
]
AAT17_00830
Enzymes [BR:
nom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAT17_00830
Messenger RNA biogenesis [BR:
nom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAT17_00830
DNA repair and recombination proteins [BR:
nom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AAT17_00830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HEM4
Motif
Other DBs
NCBI-ProteinID:
ALM19900
UniProt:
A0AAI8FZA3
LinkDB
All DBs
Position
154909..156777
Genome browser
AA seq
622 aa
AA seq
DB search
MIDYAREILKNTFGYDCFKGNQEEVISNILKGNDTIALLPTGGGKSVCYQVPGLTMNGIT
IVISPLVALIKDQVQSLRSRQIKVIEITSGISHQELDERLDNCIYGNYKFLYLSPERLQQ
DLVQQRLQKMPINLIAVDEAHCISEWGHDFRPAYRGIKILRELGIAAPMVALTATATAQV
QQDIAINLELKDPVVIKSSFKRHNIKYQFVQTENKLSVLIEYLKELTGSCIIYMRSRKNT
VILANQLKARGITATHYHGGLTPKQREQHTQSWMNNSSQVMVATNAFGMGIDKPDVRQVY
HLQFPDSIESYYQETGRAGRDGKPSNAIFIFNRNDVNHAHHQFVASQPDKHYLKKIYKHL
HNYLNIAFGEGYQTTHYLSFSQFCKTYDLLGLPAHTALNTLDRFGIIKLSPVFKRKCLVR
FRESAEKTRQFAQTNDSYYAIIQAILRTYGGSSNQNISVQIPLIAHRSNTTEAQVIQTLS
KMHEQQLADVTLINTDNSISFLEPRDDDRAINRISRELEIQNSHKAEKLQALVKIVFNTE
ICINKMLLSYFGEKNTENCGSCSNCVIINESNLLPFFNHPTTLSQVSISSGITMENLISS
VKSLMENNKLKKVQNNLFQINE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatagattacgctcgcgagatattaaaaaacacttttggctatgattgctttaaaggt
aatcaggaagaagttatatcgaatatcttaaaaggtaatgacaccatagcactcttacct
actggtggtggtaaatcagtttgttaccaggttcctggattgacaatgaatggtattact
attgtaatatctccacttgttgctttaattaaagatcaagtacaatctttaagatctaga
caaattaaagtaatagaaattacaagtggtataagccatcaagaactggatgaacggctg
gataattgtatatatggtaattataaatttttatatctcagtccagagcgtttacaacaa
gaccttgttcaacaaagacttcaaaaaatgcccataaacctaatagcagttgacgaggca
cattgcatcagtgaatggggacatgattttagaccagcttatcgaggtattaaaatttta
cgtgaattgggaatagcagcacctatggtggcacttacagcaactgctactgctcaggtt
cagcaggatattgccataaacctggaattaaaggatcctgtagttataaaaagtagtttt
aaacgccataacattaagtatcaatttgttcaaactgagaacaagcttagtgtattaata
gaatatttaaaggagcttactggcagctgtataatctacatgcgcagcagaaaaaatact
gttatacttgctaatcaacttaaagcacgaggtattactgcaactcactatcacggtgga
cttacacccaaacaacgagaacagcacacacaatcatggatgaataacagttctcaagtt
atggttgccacaaacgcgtttggaatgggtatagataaaccagatgtaagacaagtgtat
cacctgcaatttcccgatagtattgaaagttattatcaagaaacaggccgtgctggacgt
gacggtaaaccctcaaatgccattttcatatttaatcgtaatgatgtcaatcatgctcat
catcaatttgtggcttctcaacccgataaacattacttaaaaaagatttacaaacattta
cataactatttaaatattgcttttggagaaggttatcaaaccactcattacttatcgttt
tctcaattttgtaaaacctatgacttattaggactacctgcccatacagcacttaatact
ttagatagatttggaattataaagttgtctcctgtgtttaaaagaaagtgtttagtacgc
tttcgcgaaagcgcagaaaaaacaagacagtttgcccaaactaatgattcctattacgca
atcatccaagctattttgcgcacctatggtggaagcagtaatcaaaatataagtgttcaa
ataccgctcattgctcacagaagtaatacaactgaagctcaagtaatacaaactctatca
aaaatgcacgagcaacagctagccgatgttactttgataaacaccgataattctatctct
tttttagaacctagggatgatgatcgagcgattaatagaatttcaagagaactagagata
cagaattcccacaaagcagaaaagctacaggctcttgttaaaatagtatttaatacagag
atttgtataaacaaaatgttactctcctatttcggagaaaagaatactgaaaattgtgga
tcttgtagtaactgcgttattattaatgagagtaacttgttgcctttttttaatcaccca
actaccctatcacaagtttccatttcaagtggtattacaatggaaaatttgatttcatca
gtaaaatccttgatggagaacaataaacttaaaaaagtacagaacaatttatttcaaata
aatgagtaa
DBGET
integrated database retrieval system
