Nonlabens sp. MIC269: AAT17_02725
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Entry
AAT17_02725 CDS
T04144
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nom
Nonlabens sp. MIC269
Pathway
nom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT17_02725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nom03019
]
AAT17_02725
03009 Ribosome biogenesis [BR:
nom03009
]
AAT17_02725
Enzymes [BR:
nom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAT17_02725
Messenger RNA biogenesis [BR:
nom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAT17_02725
Ribosome biogenesis [BR:
nom03009
]
Prokaryotic type
rRNA helicases
AAT17_02725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
NAT10_TcmA_helicase
Cas3-like_C_2
DUF5679
Tht1
MtrA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALM22109
LinkDB
All DBs
Position
complement(599253..601067)
Genome browser
AA seq
604 aa
AA seq
DB search
MGFENPTEIQQQAIPILLQHDGDFIGLAQTGTGKTAAFGIPLLELMDTSSDDTQALILAP
TRELAQQICKQLDLMSSKLGKLKIVPVFGGANIMGQIKDLRRGAQVIVATPGRLMDLMKR
KEVRLDSLRFMVLDEADEMLNMGFKEDIDYILSKSDMGRNIWLFSATMAREIKQIVNTYM
NNPQEVKVNRENIVNTNISHEYVQLKASDKIEGLRRMLDYDQDMFGVVFCRTKRDTQNVA
DQLNNNGYSTEALHGDMSQHQRDAAMKRFRDKNINLLIATDVAARGIDVDDITHVIHLAL
PDDPEFYTHRSGRTARAGKKGVSMAFVTKGDTRKLKFLERKLGINFEKGEIPKIEDIADK
RINRWTEQLIVQDLHKKLNVETVDGVMAALEGITKEQLVMKFLSREFESIYKRSSITDVN
DRSKGRDRDSGKDRGYKTNGKEEGMKTFFLNLGRKDDVNKGAILGFICDVTGIKGKEVGR
ILVEGAHSFIDVSEEVAPLMKVLDGAQRDGRELRCNEHKGEVRRSRDRGRSGGRDRNRGR
GGKKRENNNGSFKGRSKRSDFDKSGSRPNKDDKVVEFPSKRKGNSSKGKSKKKGRSNFFG
SKWD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgagaatccaacagagattcaacagcaagcgattcccatcttgttacaacat
gatggagattttataggtctggcgcagaccggtacagggaaaacagcagcttttggtatt
ccattactagagctcatggacacatcgtcagacgatacacaggcgcttattctagcacct
actcgtgaactagcacaacaaatttgtaagcagttagacttaatgtcttccaaattgggt
aagttgaaaattgtacccgtctttggaggagctaatatcatgggtcaaatcaaggatttg
agaagaggagcacaagtaattgttgctactccaggtcgtttgatggacttaatgaaacgt
aaggaagtacgcctagattccttaagattcatggtgcttgatgaagccgatgaaatgctt
aacatgggattcaaggaagatatcgattacatcctttctaagagtgatatgggtagaaat
atttggttgttcagtgctactatggcacgtgagatcaagcaaatcgttaatacctacatg
aacaatccacaggaagttaaggttaatcgtgagaatattgtaaatacaaatatttctcat
gaatacgtacaacttaaagcaagtgacaagattgaaggattgcgtcgtatgttagattat
gatcaggatatgtttggtgtagtgttttgtagaacaaaacgcgatacgcaaaatgtagcc
gatcaattaaataataacggttactcaaccgaagctttacacggtgatatgtcgcaacat
caacgagatgcagcgatgaagcgctttagagataaaaatataaaccttcttattgctacc
gatgttgctgcaagaggtattgatgttgatgatattactcatgtaattcaccttgctcta
ccagacgatccagaattttacacacaccgatctggtcgtactgcacgtgctggtaaaaag
ggtgtttctatggcctttgttaccaaaggagatactcgtaaacttaaatttctagaacgt
aaattaggaataaactttgaaaagggtgaaattcctaagattgaagacatagccgataag
cgtattaatcgttggacagaacagcttattgttcaagatctacacaagaaactgaatgtt
gaaacagtagatggcgttatggcagcacttgaaggtattaccaaagaacaattggtaatg
aaattcttgagtcgtgaatttgaaagtatttacaagcgctcttctattactgatgtaaat
gatcgcagcaagggacgtgatagagattctggtaaggatagaggttataaaactaatggt
aaagaagaagggatgaaaacattcttcttaaacctaggtcgtaaagacgacgttaataaa
ggtgctattcttggttttatttgtgatgttactggaataaaaggaaaagaagttggaaga
attctagttgaaggtgcacattcgtttattgacgtaagtgaagaagttgctccacttatg
aaagttctagatggagcacaacgcgatggacgtgaattacgatgcaatgaacacaaaggt
gaggttagaagatctagagatagaggtcgtagcggtggtcgtgatagaaatcgcggtcgc
ggtggaaagaagcgtgaaaacaataatggttcttttaaaggacgctcaaagagatcagac
tttgataagtcaggatctagacccaataaagatgataaggtagttgaattcccaagtaaa
agaaaagggaatagtagtaaaggaaaatcaaagaaaaaggggagatcaaatttctttgga
tctaagtgggattaa
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