Nonlabens sp. MIC269: AAT17_02860
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Entry
AAT17_02860 CDS
T04144
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
nom
Nonlabens sp. MIC269
Pathway
nom02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AAT17_02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nom03021
]
AAT17_02860
Transcription machinery [BR:
nom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAT17_02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
IF2_N
HTH_5
DUF7443
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ALM20262
LinkDB
All DBs
Position
630082..630945
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRESKSLDKYLQDISKIDLITAEEEVELAQRIKKGDQRALERLTTANLR
FVVSVAKQYQNQGLKLPDLINEGNAGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAFSHLEQLHERPPSPEELAKELDMTVSDVKQSLKNAGRHV
SMDAPLKEGETSNLYDVVRSGESPNPDKELLHESLTLEIKRALETLSQKEADVISLYFGI
GNQQPMSLEEIGETFDLTRERVRQIKEKGIKRLRQNSRSKILKSYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaaaatcaccaagcaggttacaaaccgtgagtctaaatcgctggataag
tatctacaagacatctctaaaattgatcttatcaccgcagaggaagaagtagaattagct
cagcgcattaaaaaaggtgatcaaagagccctagaaagactgactacagcaaacttacga
ttcgtagtttctgtagcaaaacagtaccaaaatcaagggcttaagttgccagatctaatt
aatgaaggaaacgccggactcgtaaaggctgcaaaaagatttgatgagactcgtggattt
aaatttatatcatacgcagtatggtggatccgtcagtctattctacaagcactagcagag
cagtcacgtatcgtgcgcctaccattgaacaagatcggttctattaacaagattaataag
gcattttcacaccttgagcaattgcacgagcgtccaccatcacctgaagaactagcaaaa
gagctagacatgacagtgagcgacgttaagcaatctcttaaaaacgctggacgtcacgta
tccatggatgctccgcttaaagaaggagaaacatcaaacctttacgatgttgtacgcagt
ggtgagtcacctaatccagataaggaattattacatgagtcgttaacgttagaaattaag
cgtgcacttgaaaccttatctcaaaaagaggcagatgttatttccctttacttcggtata
ggaaatcaacaacctatgagtcttgaagaaataggtgaaacttttgacttaactcgtgag
cgcgtgcgccagattaaagaaaaaggtattaagagattaagacaaaactcaagaagtaaa
atccttaagtcatatttagggtaa
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