Nonlabens sp. MIC269: AAT17_03610
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Entry
AAT17_03610 CDS
T04144
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nom
Nonlabens sp. MIC269
Pathway
nom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT17_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nom03019
]
AAT17_03610
Enzymes [BR:
nom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAT17_03610
Messenger RNA biogenesis [BR:
nom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAT17_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Fe-ADH
P-loop_SecA
UvrD-helicase
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
ALM20381
UniProt:
A0AAI8BUI4
LinkDB
All DBs
Position
complement(787414..788682)
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AA seq
422 aa
AA seq
DB search
MLFKDLGLSAALLKAIDKKGYSQPSPIQEKAIPQVLQGKDVLASAQTGTGKTAGFTLPLL
HRLGESKAKKRPVRALILTPTRELAAQVYDNVKEYSEFLNIRSAVIFGGVNQNPQVDLLK
KGVDVLVATPGRLIDLNNQGFLKLNQVETLVLDEADRMLDMGFLRDIKRILALLPVKRQN
LLFSATFSKEIKKLAASFLNNPVLVEATPENTTAEKVDQLMYRVDTKQKQDVLINMITEG
NWSQVLVFTRTKHRANRLAEKLNKSKVTAAAIHGNKSQGARTRALAGFKDSSIRVLVATD
IAARGLDIPLLPYVINYELPNVPEDYVHRIGRTGRAGASGQAISLVAGDEVSYVKGIEKL
LDQRFDFEIIEGYEPDPNAPTEKPKPKQRGRKNHGKRSSSNRNKNNSSRSNRNKNRKGLK
RN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaaagatttaggcttatctgctgccttgttgaaagcgatcgacaaaaaagga
tactcacagccttctcccattcaggaaaaagctataccacaagtattacaaggtaaggat
gttctagccagtgcacaaactggtaccggaaaaacagctggatttacacttccattgcta
catagattaggagaatctaaagcaaaaaagagaccagtgcgagctcttattttaactcca
acaagagaacttgctgctcaagtatatgataatgtaaaagagtacagtgagtttttaaac
atacgtagtgctgttatttttggcggagttaatcagaatcctcaagttgatttacttaaa
aaaggtgttgatgttcttgttgcaactccaggacgattgatcgatcttaataatcaaggt
ttcttaaaacttaatcaagtagaaaccttagttctagacgaggcagatcgtatgttggat
atgggatttctaagagacataaaacgtatactagccttgctgccagtaaaaaggcaaaac
ttattattctcagctacattttcaaaagaaataaaaaaactagcagctagtttccttaat
aatccagtgttagtagaagcaactccagaaaatactactgccgaaaaagtagatcaactc
atgtatagagttgatacaaaacaaaagcaagacgtgttaatcaatatgataaccgaagga
aattggtcacaggttctagtatttactcgtactaaacatagagcaaacagacttgctgaa
aaattgaacaaatccaaagtaactgcagctgctatacatggtaacaaaagtcaaggtgct
cgtacaagagcgctagctggatttaaagactctagtattagagttttagtggcaactgat
attgctgctcgtggattagatatcccattattaccttatgtgatcaattatgagctgcct
aatgtgcccgaagattatgttcataggataggtcgtacaggtagagcaggcgctagtgga
caggcaatttctctagtagctggtgatgaggtttcttatgtaaagggaattgaaaaactc
ctagatcaacgattcgattttgaaattatagaaggttatgaaccagatcctaatgcgcct
actgaaaagcctaaaccaaagcagcgaggtcgtaagaaccatggcaagcgcagttcttca
aataggaacaagaataattcttcacgttctaatcgtaataaaaatcgtaaaggtctaaaa
cgtaattaa
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