Nonlabens sp. MIC269: AAT17_03900
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Entry
AAT17_03900 CDS
T04144
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nom
Nonlabens sp. MIC269
Pathway
nom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAT17_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nom03021
]
AAT17_03900
03400 DNA repair and recombination proteins [BR:
nom03400
]
AAT17_03900
Enzymes [BR:
nom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAT17_03900
Transcription machinery [BR:
nom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAT17_03900
DNA repair and recombination proteins [BR:
nom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAT17_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ALM20436
UniProt:
A0AAI8BUP3
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All DBs
Position
complement(851677..852669)
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AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSIRIE
GVDHEFSTIEGVVEDVTEMVLNFKQARFRRQIDEVDSEVVNISFGGKEQFTAGDMQKYIS
GFQVLNPELVICNTDPSVNLNLEITIEKGRGYVPAEENKNPSAPIGTIAIDSIFTPIKNV
KYSIENYRVEQKTDYEKLVFEIQTDGSIHPKLALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMELSVRALNCLKAAEVETLGDLVSYNKNDLMKFRNFG
KKSLTELEELVNTKGLNFGMDLSKYKLDRD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcagaagcctgataaagtaatcatgatcgactctactgatttc
gagggtaaattcgagttcagaccgttggagccaggttatggattgactgttggtaatgcc
ttgcgtagagttttgttgtcttctttagaaggtttcgcaattacttctatacgcatagaa
ggtgtagatcatgaattttctactatagaaggtgtagttgaggatgttaccgaaatggtg
cttaatttcaaacaagcccgttttagaagacaaatcgacgaagtagatagtgaggtagta
aatatttcatttggtggtaaagagcaatttactgctggtgatatgcaaaagtacatctct
ggttttcaagttttaaatcctgaattggttatttgtaacacagacccttcagtgaattta
aatctagaaatcactattgaaaaaggtagaggttatgttcctgctgaggagaataaaaat
ccttctgcacctataggtacaatcgcaattgattctatatttactcctatcaagaacgtt
aagtatagtattgaaaattaccgtgttgaacaaaaaacggattatgaaaaattggttttt
gaaattcaaacagatggtagtattcatcctaaattagcccttactgaggctgctaagacg
ttaatccatcacttcatgttattcagcgatgaaagaattacacttgaagcagatgaaata
gcgcaaacagaaacttatgatgaagaaagtcttcacatgagacaacttcttaaaactaaa
ctggttgatatggagttatctgtacgtgcattaaattgtcttaaagctgcagaagtagaa
actttaggtgatttagtttcatataacaaaaacgatttaatgaagtttagaaactttggt
aaaaagtctttaactgaattagaagagttagttaatactaaaggtttgaactttggtatg
gatttaagtaaatataaattagaccgtgactag
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