Nonlabens sp. MIC269: AAT17_09275
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Entry
AAT17_09275 CDS
T04144
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nom
Nonlabens sp. MIC269
Pathway
nom03030
DNA replication
nom03430
Mismatch repair
nom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAT17_09275
03430 Mismatch repair
AAT17_09275
03440 Homologous recombination
AAT17_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nom03032
]
AAT17_09275
03400 DNA repair and recombination proteins [BR:
nom03400
]
AAT17_09275
Enzymes [BR:
nom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAT17_09275
DNA replication proteins [BR:
nom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAT17_09275
DNA repair and recombination proteins [BR:
nom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAT17_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ALM21407
UniProt:
A0AAI8G0G9
LinkDB
All DBs
Position
complement(2009207..2013553)
Genome browser
AA seq
1448 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRVVQIAWQLHDEMGILIEHEDYLIKPDGFDIPY
DSERVHGISTQLAQEQGIALEEMLEKFNIALSKTKFVVGQNLNFDLMVTGSEFVRAQIAN
QLQEIPVLDTCTEHTAQLCQIPGGRGGKFKLPTLTELHEFLFGEPFSEAHNATADVEATT
RCFLELVRKQQYTREQLDVEEDYFLRFKQSNPSTIAPVGLKHVNLQKASAALKKDEEPVV
SNQEIKENLAELSDAPFVHLHNHSQFSILQSTASVKDLAEAAAANNMTAVAMTDHANMMG
AFHFVRAIQAVNKTIADGEEEREPIKAIIGCEFQVCENMNDKSIKDNGYQIVILAKNKKG
YHNLAKLASKAFTDGFYYVPRIDKELLLQYKDDLIVLTGNLYGEVPSKILNIGEKQAEEA
LLWWKQNFGDDLYIEIMRHGQEDETRANQVLIALSRKHDIKIVATNNTYYIHKEDANAHD
ILLCVRDGEKQSTPIGRGRGYRYGLPNDQYYFKSSEEMKELFKDLPDAILNIKEVIDKIE
PFELARDVLLPAFDIPERFIDPDDATEGTKNGENAYLRFLTYEGAKERYGEELTDDIKER
LDFELDVIAKTGYPGYFLIVWDFIKAARDMGVAVGPGRGSAAGSAVAYCLKITNVDPIHY
DLLFERFLNPDRVSMPDIDIDFDDENRYKVMDYVIEKYGSNQVAQIITYGTMAAKSSIRD
TARALDLPLMDADRVAKLIPDFAKLKKMFALEEKEIGSKFRGEDADNVRELLQLSEGNDL
TADTIQKARILEGSVRNTGVHACGVIITPDDLTNFVPVATAKNSDLYVTQFDNEVVESAG
LLKMDFLGLKTLSQIKDTVAIIKERHGIDIDIEAIPLDDPKTYELFQRGETTGIFQYESV
GMQKYMRELKPTQFPDLIAMNALYRPGPLEYIPEFIARKHGDKEIVYDLEACEEYLAETY
GITVYQEQVMLLSQKLANFSKGDADVLRKAMGKKQMATLMKMKPKFLDAGEKNGHDREVL
EKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKANYPAEFMAATLSNNMNNIKDVTKFM
DECRRMGLDVLGPDVNESNYKFTVNKEGAVRFGMGAVKGLGHGAVMTIIENRKDGPYKSI
FDLGKRIDLRAANKKSFEALALSGGFDSLGGENRALYFHAADNGQTFLEQVIKYAQKYQE
NENSAQMSIFGEASEVQIPEPMLPVCESWGTMEKLKREKEVVGIYISGHPLDDYKKEMQF
FCNSNLNAMKVLPELVGKELTFAGVISSVSHMMSKQNKPWGMFTLEDYDESHEFRMFGEE
YLKFRHFLIPNTFVHCKVTVQQGWIDKKTGKPRDPRLSFIQMQQLQDVMQHAAKNLTLEF
SLNEVLESKIQTLKEVLDKHTGEQFLYINIRDHEEKIALDMTSRMQKVSVNSELLDMLDN
LDITYKVG
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatactgaaactaccggtttacccaaacgatgggacgcaccaata
accgacacagataactggccacgtgtagttcaaattgcatggcagttacatgatgaaatg
ggtattcttattgaacatgaagattatttgatcaaacctgatggatttgacatcccatat
gattcagaacgtgtacatggaatatcgacacaactagcccaagagcaaggaatagcgctc
gaggaaatgctagaaaaattcaatattgccctatcaaaaacaaaatttgtggtaggtcaa
aatttgaattttgacttaatggttactggatcagagtttgtgcgagcacaaatagccaat
cagcttcaagaaattccagttctagatacctgtacagaacatactgcacagttatgtcaa
attccaggtggacgtggaggaaagtttaaacttcctacccttaccgaattacatgaattt
ttatttggagaaccatttagtgaagcacacaatgcaactgccgatgttgaggcaacaaca
cgatgcttccttgaactggttagaaaacaacagtacacaagggaacaactagatgttgaa
gaggattatttccttagattcaaacaaagcaacccatctactatcgctcctgtaggatta
aaacatgttaatctacaaaaagcaagtgctgcgcttaaaaaagatgaggagcctgtagta
tccaatcaagaaataaaagaaaatttagctgaattaagtgatgcgccctttgttcattta
cacaatcacagtcaattttctattctacaatcaacagctagtgtaaaagaccttgccgaa
gctgcagcagccaataacatgaccgctgttgcaatgaccgatcatgcaaacatgatgggt
gcatttcattttgtaagagccattcaagcggtaaataaaacaattgcagatggtgaagag
gagcgtgagcccattaaggccatcataggttgtgaatttcaggtttgtgaaaacatgaat
gacaagtctattaaagacaatggatatcaaatcgttattcttgccaagaataaaaagggt
taccataaccttgcaaaacttgctagtaaagcctttaccgatgggttttactacgtaccg
cgtatcgataaagaattattgcttcagtataaggatgacctaattgtgcttaccggtaac
ctatacggtgaggtcccttcaaaaattttgaatatcggtgaaaagcaggctgaagaagct
ctgctttggtggaaacaaaactttggcgatgacctttatattgagattatgaggcatggt
caagaggatgaaactagagcaaatcaagttttaattgcgctttcgcgaaagcatgatatc
aaaatagttgcaaccaataatacgtactacatccacaaagaagatgcaaacgctcacgat
atcttactatgtgtaagagatggagaaaaacaatctacacctataggacgtggacgtggt
tacaggtatggcttgccaaatgatcaatactattttaaaagctctgaagaaatgaaagag
ctttttaaagacctgccagatgctattcttaatatcaaggaagtaattgacaaaattgaa
ccctttgaacttgctcgtgatgtattattacctgcatttgatatacctgaacgatttata
gatcccgatgatgctactgagggaaccaaaaatggtgagaacgcctacttaagatttctt
acttatgaaggagccaaagaacgttatggagaagaattaactgacgacatcaaagaacga
ttagattttgaacttgatgttattgccaaaacgggttacccaggttactttcttattgtt
tgggattttattaaagcagcaagagatatgggcgttgccgttgggcctggacgtggtagt
gctgcaggtagtgctgttgcctattgtttaaaaattaccaatgttgatcccatacattat
gatttactttttgagcgtttcctaaatccagatcgcgtatcaatgccagatattgatatt
gattttgatgatgaaaatcgatataaagtaatggactatgtaattgagaaatatggttcc
aaccaagtagcccaaatcatcacttacggtacgatggctgcaaaatcatccataagagac
acggctagagcactagatctacccttaatggatgctgatagagtagcaaagctaattcct
gattttgcaaagcttaaaaaaatgtttgctctcgaggaaaaagaaataggctctaaattt
agaggagaagacgctgacaacgtaagggaattgttacagttatcagaaggaaatgacctg
acggccgacaccattcaaaaagctagaattctagaaggttcagtacgtaatacaggtgtt
catgcttgtggtgtcataattactcctgacgatctaaccaattttgtccctgtagcaaca
gcaaaaaactcggatctatacgttactcaatttgataacgaggtagtagaaagcgctggt
ttgttaaaaatggacttcctagggcttaaaaccttatcccaaataaaagatacggtggcc
atcataaaggagcgacatggaattgatattgatattgaggccataccactagacgatcca
aagacctacgaattatttcaacgtggagaaaccacaggtatttttcaatatgaaagtgtg
ggaatgcaaaaatacatgagggaattgaagcctactcaattccctgatcttattgcaatg
aacgccctttatcgaccaggacctttggagtatattccagaatttattgctcgtaaacac
ggtgataaagaaatcgtttatgacctagaagcgtgtgaggaatacctagcagaaacctat
ggaattacagtttatcaagagcaggtgatgctgctgtcacaaaaactagctaatttctca
aaaggtgatgcagatgtcctgcgtaaagcaatgggtaaaaagcaaatggctacattgatg
aagatgaagcctaaatttctagatgctggagaaaaaaatggacacgatagagaagttcta
gaaaagatatggaaagattgggaagcatttgcctcttacgcatttaataaatcgcattcc
acctgctatgcctggattgcttatcaaacagcttacctcaaagcaaattatccagcagaa
tttatggcagcaacgctatccaataatatgaataatattaaggatgtgactaagtttatg
gatgagtgtagacgtatggggctggacgttttgggacccgatgttaatgaatctaattac
aagtttaccgtgaataaggaaggtgctgtacgattcggtatgggtgcggtaaaaggatta
ggtcatggcgctgtaatgacaattatagaaaaccgaaaagacggaccctacaaaagcatc
tttgatttaggtaaacgcatagacttaagagctgctaacaaaaaatcatttgaagcatta
gctctaagcggaggttttgacagcctaggtggagaaaatagagcattatactttcatgca
gcagataatggtcaaacatttcttgagcaagtaatcaagtatgctcaaaagtaccaagaa
aatgaaaacagcgctcaaatgagcatatttggcgaggcaagcgaggtacaaataccagag
cctatgttgcccgtgtgcgaaagttggggcaccatggaaaaacttaaaagagaaaaagaa
gtagtaggtatttacatttctggacatccgcttgatgattataaaaaagagatgcaattt
ttttgcaactcaaatctaaatgcaatgaaagtgttacctgaattggtaggtaaagaactc
acctttgccggtgtaatttctagcgtaagtcacatgatgagtaaacaaaataaaccatgg
ggaatgtttaccctagaggattatgatgaatctcatgaatttagaatgtttggagaagaa
tatttaaaattcaggcacttccttatacctaacacatttgttcattgtaaagtcactgta
cagcaaggatggattgataaaaaaacgggaaagcctcgcgatcctaggttaagttttatt
caaatgcagcaactgcaagatgtgatgcagcacgcagcaaaaaatttaactttagaattt
agcttaaatgaggtattagaatctaagattcaaaccttgaaggaagtattagataagcac
acaggagaacaattcctgtatataaatattagagatcatgaagaaaaaattgcattagac
atgacctcaagaatgcaaaaagtaagcgtgaattcagaattattagacatgctagataat
ctagatatcacgtacaaggttggttaa
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