Nonlabens sp. MIC269: AAT17_09815
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Entry
AAT17_09815 CDS
T04144
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nom
Nonlabens sp. MIC269
Pathway
nom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT17_09815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nom03021
]
AAT17_09815
03019 Messenger RNA biogenesis [BR:
nom03019
]
AAT17_09815
Transcription machinery [BR:
nom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AAT17_09815
Messenger RNA biogenesis [BR:
nom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAT17_09815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
ALM21503
LinkDB
All DBs
Position
complement(2181669..2183360)
Genome browser
AA seq
563 aa
AA seq
DB search
MFQIADLKSKKLPELQEIAKDLNVPKYRSLRKLDLVYKILDVQAENPKALENLDLDNKSE
DSPKKESKPDSKKESRTAPTKNNEQKKERRPRKNNNPKSAEKDKESNTSSNKSQPSKKEN
NTEETKTNDSNKNNKKSNDNRNDNRNENRNDNDTRNKNNNRNKNNNRNNNSGNNVPKGNK
DNRNRYRDPDFEFDGIIESEGVLDMMPDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLK
TGDTVLGMVRPPKEGEKYFPLIKISQINGLDPKVVRDRVSFEHLTPLFPDEKFNIAERQS
SISTRVMDLFAPIGKGQRGMIVAQPKTGKTMLLKDIANAIAANHPEVYQLILLIDERPEE
VTDMQRNVSGEVIASTFDKEAHDHVRVANIVLEKAKRMVECGHDVVILLDSITRLARAYN
TVQPASGKVLSGGVDANALHKPKRFFGAARNIEGGGSLSIIATALTETGSKMDEVIFEEF
KGTGNMELQLDRNISNRRIFPAIDLTSSSTRRDDLLLNESVSQRMWIMRKYLADMNPVEA
MEFISQRIKQTRNNEEFLISMND
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaatagctgatttaaaatcaaagaaattacctgaattacaggaaattgccaag
gatttaaacgtacctaagtatagatccctgcgcaagttggatttagtttacaaaattcta
gatgttcaagcagaaaacccaaaagctctagaaaacctagacctagacaacaaaagtgaa
gattcacctaaaaaggagtctaaaccagattcaaaaaaggagtcaaggactgcgcctact
aaaaataacgaacaaaagaaagaacgtagaccaagaaaaaacaataatccaaagtcagca
gaaaaggataaggaatctaacacttcttctaataaaagtcagccttctaaaaaagagaat
aacacagaagaaacaaaaaccaacgattctaataagaataacaaaaagtctaatgacaat
cgtaacgataatcgtaatgaaaatcgtaacgataatgacactagaaataagaacaacaat
cgcaataagaacaataaccgaaacaacaatagcggtaacaatgttcctaaaggaaataaa
gacaaccgtaatcgctatcgtgacccagattttgaatttgatggaatcatcgagagtgaa
ggtgttcttgacatgatgcctgatggttatggatttttaagaagcagtgattacaactac
ttatctagcccagatgatatttatgtttctcaatcacagataagattatttggattaaaa
acaggtgacacagtattgggtatggtacgaccacctaaagaaggtgaaaaatactttcct
ttaattaaaatttctcaaatcaatggattagatccaaaggttgttagagatagagtatct
tttgaacacctcactccattatttccagatgagaaattcaatatagccgagagacaatcc
agtatttcaactagagtaatggatctatttgcccctataggaaaagggcaacgtggtatg
attgtggcgcaacctaaaacgggtaaaacaatgctacttaaagatatagcaaacgctata
gcagccaatcatcctgaagtatatcaacttatattacttatagacgaacgtcctgaggaa
gtaacagacatgcaacgcaatgtaagcggtgaagtaattgcttcaacttttgataaagag
gcgcatgatcatgtaagggtagctaacattgttctagaaaaagcaaaaagaatggttgaa
tgcggtcatgatgttgttatcctattagattcaattaccaggctggcacgagcttacaac
actgttcaacctgccagcggtaaagtgctttctggtggtgtggacgctaatgctttacac
aaacctaaaagattctttggagctgctcgtaatatagaaggtggtggatcattatctatc
atagcaacggcattgacagaaactggttcaaaaatggacgaggtaatctttgaagaattt
aaaggaaccggtaacatggaactacaattagatagaaatatttccaatcgtagaatattc
cctgccattgatttaacctcatcgtctacacgtagagacgacttacttcttaatgaaagc
gtatcacaacgtatgtggattatgagaaaatacctagctgatatgaatccggttgaggct
atggagtttatatcacaacgaattaaacagacaagaaacaatgaagagtttctgataagt
atgaatgattaa
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