Nostoc sp. NIES-3756: NOS3756_04680
Help
Entry
NOS3756_04680 CDS
T04170
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOS3756_04680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
non03019
]
NOS3756_04680
03016 Transfer RNA biogenesis [BR:
non03016
]
NOS3756_04680
Enzymes [BR:
non01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NOS3756_04680
Messenger RNA biogenesis [BR:
non03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NOS3756_04680
Transfer RNA biogenesis [BR:
non03016
]
Prokaryotic type
tRNA degradation factors
NOS3756_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KhpA-B_KH
SLS1_KH2
aRib
Motif
Other DBs
NCBI-ProteinID:
BAT51542
LinkDB
All DBs
Position
complement(549969..552125)
Genome browser
AA seq
718 aa
AA seq
DB search
MAEFEKSISFDGRDIRLKVGLLAPQAGGSVLIESGDTAVLVTATRSQAREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKAILTSRLIDRPLRPLFPSWLRDDLQVIAFTMSMDE
QVPPDVLAVTGASIATLIAQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGELDLIVAGS
PDGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIKAQQDLVAELGLEIVQEVRPEVDQTL
ENYIRDRANDEIKKILAQFELTKPERDAALDVVKENIATAIAELPDEDPIKVAATADGKA
LGNTFKDITKYFMRRQIVEDNVRVDGRKLDEVRPVSCQVGVLPKRVHGSGLFNRGLTQVL
SACTLGTPGDAQNLNDDLQTDQSKRYLHHYNFPPFSVGETKPLRAPGRREVGHGALAERA
ILPVLPPKEQFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPILKPVSGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLEVIAQAIHQAKSAR
LHILDKMLQTIDTPRTETSPYAPRLLTIKIDSDMIGLVIGPGGKTIKGITEETGAKIDIE
DDGTVTISAVDETKAKRAKNIIQGMTRKLNEGDVYAGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAAAAREAAAVNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgagaagtcaatatccttcgatggaagggatattcgactgaaagtaggc
ctactagcaccccaagcgggtgggtcggttttgatagaatcgggggatacagctgttcta
gtgacagctacgcgatcgcaagccagagagggcattgattttcttcccctgacagtagat
tacgaagaaagattgtatgcggcggggagaatccctggtgggattatgcgccgagaaggt
cgtccgccagaaaaagccattctcaccagccgtttgatagaccgtcctctgcgtcctttg
ttcccttcatggttgcgggatgacttgcaagtcatcgcttttacaatgtcgatggatgaa
caagtaccaccggacgtattagcagtaacaggtgcttccattgccaccttaatcgcgcaa
atcccctttaacgggccaatggcagccgtgagggtaggtttagtgggcgatgacttcatt
attaaccccacctacgcagaaattgaagctggggaattggatctgattgtcgcaggttca
cctgatggtgtaatcatggtggaagctggggcaaatcaattacccgagcgagatattatt
gaggcgattgattttggttatgaagctgtgcgtgacttaatcaaagcgcagcaagaccta
gtagccgaactcggtctagaaattgtgcaggaagtacgaccagaggtagaccaaaccctg
gaaaattatatccgcgatcgcgctaacgacgaaattaagaaaattctggctcaatttgaa
ctaaccaaacccgaacgcgatgctgcgttggatgttgttaaagaaaatattgccacagcg
atcgccgaactcccagacgaagacccaattaaggtagcagccaccgcagacggcaaagct
ctgggcaacacttttaaagacattactaagtacttcatgcgccgtcaaatcgttgaagat
aacgtgcgcgttgatggtcgtaaacttgatgaagtgcgtccagtctcttgccaagttggt
gttttacccaagcgcgtccacggtagcggcttatttaatcggggattaactcaggtttta
tccgcttgtaccttggggactccaggcgatgcccaaaacctcaacgatgacctgcaaaca
gaccaatccaaacgctacttacatcactacaacttcccacccttctccgtgggcgaaacc
aagcctttacgcgcccctggtagacgggaggttggtcacggtgcattagcagagagagcc
atcttacctgtactacctcccaaagagcaattcccttacgtgattcgtgtcgtttcggaa
gtactttcttccaacggttccacctcaatgggttcagtctgcggttccaccttggcctta
atggatgcaggtgtgccaattcttaaacccgtgagtggtgcagcgatgggtttgattaag
gaaggtgatgaagtccgagtcttaacagatattcaaggcattgaagacttcttgggtgac
atggactttaaagttgcagggacggatacaggtattaccgccttgcaaatggacatgaaa
atctctggtttatccttagaggtgatagcccaagccatccaccaagccaaatctgctagg
ctgcatattttggacaaaatgctccaaactatcgacaccccacgcaccgaaacatcaccc
tacgcgcctcgcctgttgaccatcaagattgactcagacatgattggtttagtcattggg
cctggtggtaagacaattaaaggtattaccgaagaaactggtgcgaaaattgacatcgag
gatgatggcacagtcaccatttctgcggttgatgaaaccaaagcgaagagagccaagaat
attatccaaggcatgacccgtaagctgaatgaaggcgacgtttacgcgggacgtgtgacg
cggattatacctattggtgcttttgtggaatttctgccagggaaggaagggatgatccac
atttcccaactagccgattatcgtgttggtaaagttgaggatgaagtagcggttggagat
gaagttattgtcaaagtgcgcgaaattgacaataaaggacgaattaatctcacccgcttg
ggtatacacccagaccaagcagctgcggcgcgggaagctgcggcggtgaatcgttaa
DBGET
integrated database retrieval system
