Nostoc sp. NIES-3756: NOS3756_08070
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Entry
NOS3756_08070 CDS
T04170
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03420
Nucleotide excision repair
non03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NOS3756_08070
03430 Mismatch repair
NOS3756_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
non03400
]
NOS3756_08070
Enzymes [BR:
non01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOS3756_08070
DNA repair and recombination proteins [BR:
non03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOS3756_08070
MMR (mismatch excision repair)
Other MMR factors
NOS3756_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
NPHP3_N
SBP
DUF3138
Motif
Other DBs
NCBI-ProteinID:
BAT51876
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All DBs
Position
complement(934695..937112)
Genome browser
AA seq
805 aa
AA seq
DB search
MTDTNITEIQSASVQTELSFVASLEEKIAAIRQTLRPGQQQMADWQSGPLAVSAVPGAGK
STGMAAAAAIAIARQYQQVAQSAKSSRCQLVVVTFTRSAAANIKSKIRYYLKQLSLPQTG
FAVYTLHGLALNIASRHPDLSGLELENVTLITPNQSHRFIRTAVEIWINNHPRLYLQLLE
GQQFDGEETERLRRQSVLRTEVLPDLATTVIHEAKSSGISPTQLRQWSQQTTNAYEILTI
AAGLYEQYQDLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQT
RLLEILAAGSRSQEPGVNSYLPHPPHLSHSPLPTPHSPINLVRVGDPNQAINSTFTPADP
IYFREFCQECDRSHRLATMDQAGRSTAMIINAANFALEWVNSFYGAKNQQSSHTPISTPF
SLQKIRPVNLTDVNPAPIGKGLELHTPRDIFQTVELLSKRVVELFTEDMGKNAAVLVREN
RQGRWFAEALAPICKEHNITLFDVGESDRRSHVPQEILALLQFCDRPHSPDYLKSALEVL
VQRQLIPTQDLNALASLPEEFLYPSPLAAPQSEPVQKASHLCRSLLRARLELPLYQIISF
LALTLNYDQAELATADKLSERVNKQIAGSNSMGAMLSALSEIVSSERFEPVETDDAEARY
TRNGQLTIITMHKAKGLDWNYVFIPFLHENLIPGRFWVPPQSQFLGDFTLSEVARAQIRA
ALHGEAEIPEVTPAWEQAKHLKTAEEYRLLYVAMTRAKQLLWMSAAQKAPFTWSKPENLQ
EQAPCPVFPALKRQFPECVVSCNKG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacagatactaatattaccgaaatacagtcagcatctgtgcaaacagaattatcattt
gttgctagcttagaagaaaaaattgcagctattcgtcaaactttacgcccaggacaacaa
caaatggcagactggcaatcagggcctttggcggtgtcggctgtaccaggtgcgggtaaa
tctaccggaatggcggcggcggcggcaattgcgatcgctcgtcagtatcagcaggtggcc
cagtcagcgaaatcttctcgttgtcagttagtagtagtcacttttactcgttcggcagct
gccaatattaaatcaaaaattcgttactaccttaaacaattatctttacctcaaactggt
tttgccgtctataccctacatggtttggctttaaatattgccagccgtcatccagattta
tcagggttagagttagagaatgttactctcatcacccccaaccaaagccatcgctttatt
cgtacagcagttgaaatatggattaacaatcaccccagattatatttgcagttattagaa
ggacaacaatttgatggtgaagaaacagaaaggttacgccgtcagtcagttttacgcaca
gaagttttaccagatttagcaactacagttatacacgaagccaaaagttccggcatatca
ccaactcaacttagacaatggagtcaacaaactaccaacgcctatgagattttaaccata
gcggcgggattgtatgaacagtatcaagacctaatgcgatcgcgtgactttattgactac
gacgacatgattttagccgccctacgtgtcttagaaaacgatagcgcccggcgaattgag
caaaaccaagttttcgcagtctttgaagacgaagcccaagattctagtcccttgcaaacg
cgactgttagagattttagcagcagggagcaggagccaggagccaggagttaatagttat
ctccctcatccccctcatctctcccactccccactccccactccccactcccccataaac
ctagttcgtgttggtgatcctaaccaagcgattaactcgacttttaccccagccgatccg
atttactttcgggaattttgccaagagtgcgatcgctcccatcgactagcaacaatggat
caggctggtcgtagtaccgcgatgattattaacgccgctaactttgccttggaatgggtg
aatagtttttacggtgctaaaaatcaacagtcttcccatacccctatttccactcccttt
agtctgcaaaaaattcgtccagtaaatttaactgatgtcaaccctgcaccaataggtaag
ggattagaactgcatacaccgcgtgatatttttcagacggtggaattattatctaaaagg
gtggtggagttattcaccgaagacatgggcaagaatgcggcggtgttggtgcgggaaaat
cgtcaagggcgttggttcgcagaagcactagcacctatatgtaaagagcataatattaca
ttgtttgatgtgggagaaagcgatcgccgttctcatgttccccaagaaattttggcattg
ttgcaattttgcgatcgtcctcattctcccgactacctcaaatctgccttagaagtatta
gtgcagcgtcaattaattcctacccaagatttgaacgctcttgctagtttaccagaagaa
tttttgtatccaagccccctagccgcaccccaatcagagccagtacaaaaagcttcacat
ctctgccgtagtttactgcgtgcgcgtttagaactacctctatatcaaatcatttccttc
ctcgccctaaccttaaattacgaccaagcagaactagccacagccgataaactttcagaa
cgggtaaataaacaaatagctggtagtaactcgatgggagctatgctttccgccttaagt
gaaattgtcagttccgaaaggtttgaaccagtagaaacagacgatgcagaagctcgttac
acccgtaatggtcaattgactattattactatgcacaaagccaaagggctggattggaac
tatgtgtttattcccttcctgcatgaaaacttaattcctggtagattttgggttccgccc
caaagccagtttttgggtgactttaccttatcagaagttgcccgcgctcagattcgtgct
gcactccacggtgaggcggagataccagaagtaacaccagcttgggaacaagcaaaacat
ctgaaaacagcagaagaataccgtttactctacgtagctatgacaagggcaaaacaacta
ttgtggatgtctgcggcacaaaaagccccatttacctggagtaaaccagagaacctacaa
gaacaagctccctgtcccgtgtttccagcattaaagcgtcagtttcccgaatgtgtagtt
tcgtgcaataaaggctag
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