Nostoc sp. NIES-3756: NOS3756_24570
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Entry
NOS3756_24570 CDS
T04170
Symbol
crhC
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOS3756_24570 (crhC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
non03019
]
NOS3756_24570 (crhC)
Enzymes [BR:
non01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NOS3756_24570 (crhC)
Messenger RNA biogenesis [BR:
non03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NOS3756_24570 (crhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
HI1480
P-loop_SecA
Utp25_C
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
BAT53496
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All DBs
Position
complement(2825641..2826960)
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AA seq
439 aa
AA seq
DB search
MSFSHLGLSNEIIRAVTELGYTKPTPIQMQAIPSVLSGRDLLAGAQTGTGKTASFTLPLL
QKLSSDKSIKSTSNEYSPIRALILTPTRELAAQVELSVREYGKYLKLNTMAMFGGVSINP
QKRLLKGRVDILVATPGRLLDHVQQGTVNLSQIEFLVLDEADRMLDMGFIRDIRRILSLL
PKQRQNLLFFATFSDKIKALATGLLNHPTIIEVARRNVTADTVTQKVYKVERDRKCQLLV
NLIRQNNWYQVLVFTRTKYGADRLVKQLTQERIQALAIHGNKSQSARTHALEKFKNDSLQ
VLVATDVAARGIDISELPHVVNYDLPNVPEDYVHRIGRTGRAGASGKAVSLVCADEYHLL
ADIEKLIEQRLPFEVVTAFGANSHIKPEAILDERKHKPKGSKILARSSAKPLPQKSAKSA
RRKVTGSKKSNVRSGTSGS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttctcatctcggcttgtccaatgaaattatccgcgccgtcacagagctaggg
tataccaaacccactcccatccagatgcaagcgattccttccgtcttgtcagggcgtgat
ttgttagctggggcgcaaactgggactggaaaaactgccagcttcaccctaccacttctg
caaaagttatcgtctgacaagagcattaaaagcacatctaatgaatactcacccatccgg
gcgctgattctcacaccgactcgtgaattagctgcacaagtggagttaagtgtgcgtgag
tacggcaagtatttgaaactgaacacaatggcgatgttcggtggagtcagcattaatccg
caaaaacggcttttgaaaggtcgagtggatattctggtcgcgactccaggacgactgtta
gatcatgtgcagcagggaacggtaaacctctcacagattgagtttttggtgctggatgaa
gcagaccggatgttggacatgggttttattcgtgatatccgtcgcattctctcactacta
cccaaacagagacaaaatctgctatttttcgctactttctcggacaaaatcaaggcacta
gctaccggactgcttaatcacccgacaatcatcgaggtagcacgccgcaacgttactgcc
gacactgtgacacagaaagtctacaaagtagagcgtgacaggaagtgccaattacttgtt
aatctgattcgacaaaataattggtatcaagtgctagtattcactcgaacaaagtatggt
gctgaccgtctggttaagcaattgacccaagagcgtattcaagcactagctatccacggt
aataagagtcagtcggcgcgtacccacgctctagagaaattcaagaacgacagtttacag
gtattggtggcaaccgacgttgcagcgcgaggtatagacatcagcgaactgcctcatgtg
gtcaattacgatctacccaatgttccagaggattatgttcatcgtattggtcgcactggt
cgcgctggtgcgtcaggcaaagctgtatcgctggtatgtgccgatgaataccatctgtta
gcagatatcgaaaaactgattgaacagcgcttgccttttgaagtggttactgcttttgga
gctaattcccacatcaagcccgaagcaattttagatgaacgcaagcataaacccaaaggt
agtaagattttggctcgctctagtgctaaaccattgccacaaaaatcagctaaatcggct
aggcgaaaggtgacaggtagtaaaaagtccaatgttcgttccggcacatcaggcagttag
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