Nostoc sp. NIES-3756: NOS3756_39300
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Entry
NOS3756_39300 CDS
T04170
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03410
Base excision repair
non03430
Mismatch repair
non03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NOS3756_39300
03430 Mismatch repair
NOS3756_39300
03440 Homologous recombination
NOS3756_39300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
non03400
]
NOS3756_39300
DNA repair and recombination proteins [BR:
non03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NOS3756_39300
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NOS3756_39300
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NOS3756_39300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF4168
Motif
Other DBs
NCBI-ProteinID:
BAT54955
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All DBs
Position
complement(4594349..4596472)
Genome browser
AA seq
707 aa
AA seq
DB search
MLDRPPQLSKPSRRLPNQRWQIHLQKTELAQKLADATNFSPIVSQLLINRGIETPEQAQA
FLEPETLNLPSPLTEFPDLTVSVELLQEAIASQSKIAICGDYDADGMTSTALLLRSLRSL
GAQVDYAIPSRMHEGYGINKRIVEEFHSEGVKLILTVDNGISAFEPIARAKELGLKVIIT
DHHDIPQKLPPADAILNPKLIAESSPYRGVAGVGVAYILAVSLAQKLDKTKGLIQPMLAL
FTLGTIADLAPLSGVNRRWVKRGLKLLPKSQLPGVQALIQVAGVQATGTEEQRKNVLLST
PHSPLPTPKSLKPEDIGFRLGPRINAVGRIGDPLTVIELLTTDDEGIALERAMQCEQANT
SRQQMCEEIEQQAIAYVESQFLSTLQQDRVLVVVQPGWHHGVIGIVASRLVERYGVPVFI
GTYEDEEHIRGSARSIPEFHVFEALEYCHDLLGKYGGHKAAGGFSLPTQNLQVLRSRLCE
FANQCLQLQHLKPLLQIDAQANFNQINQELYQQLNTLHPCGIDNPDPIFWTPNVQVVEQQ
IVGKGHIKVTLSQTINAQQYQFKAIAWRWRDYYPLPPRLDIAYKLRENNFNGNTSLELEL
LGVRLAQKQLEPLNQLQLFYSHSPKPLRTTFKHNQRQYTCGVYENNSLPELRIKNSDGKV
LVMQPGSTIGLLGTSREDALEIDLSLPQYDSIIQAAMQALSVLNVES
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctagaccgaccaccgcaattatcaaaaccttccaggcgcttacccaaccaacgttgg
caaattcacctacaaaaaacagaattagctcaaaaactggcagacgcaacaaatttctca
cctattgttagtcaattgttaattaatcgaggtatcgaaacaccagaacaagcacaagca
tttttagagcctgaaactttaaatttaccctcgccattaactgaatttccagatttgaca
gtgagtgtggagttgttgcaagaggcgatcgcatcccaaagtaaaattgctatatgcggt
gattacgatgcagatggtatgactagcaccgctttattgttgcgtagtctccgcagttta
ggcgctcaggtagattatgctattcccagccggatgcacgaaggctacggtattaacaag
cgcattgtcgaagaatttcatagtgaaggtgtgaaattaattcttactgtggataacggt
atttctgcttttgaacctatcgccagagccaaagaacttggcttaaaagtcattatcacc
gaccaccacgacataccccaaaaattaccaccagctgacgctattctcaaccctaaactc
atcgctgaatcttcaccatataggggtgtagctggtgtgggtgttgcctatattttggca
gtatccctcgcccaaaaactcgacaaaaccaaaggcttaattcagccgatgttagcacta
tttaccttgggaacgatcgcagatttagctcccctcagtggtgttaaccgtcgctgggta
aaacgcggtttaaagctgttacccaaatcccaattaccaggagtacaggcgctaattcaa
gttgcgggagtgcaagcaacgggaacagaggagcagaggaagaatgttttactctccact
ccccactccccactccccactcccaaatccctcaaaccagaagatatcggctttcgcttg
gggccacgtatcaatgcggttggtagaataggtgatcccttaacggtaattgaattatta
acaacagatgatgagggaatagctttagaacgagcgatgcaatgcgaacaggctaatact
agccgtcagcaaatgtgcgaggaaattgaacaacaagcgatcgcttatgtagaatcacaa
tttctctccactttacagcaagaccgggtattagttgttgtccaaccgggttggcatcat
ggtgttattggtattgtcgcttcccgcttggtagaacgttacggtgttcctgtgttcatc
ggtacttatgaagatgaggaacatattcgcggttcagccaggagtattcctgagtttcat
gtgtttgaggctttagaatattgtcatgatttgctgggtaaatacggtggtcacaaagca
gccggcggattttctttaccaacgcaaaatttacaggtgttgcgatcgcgtttatgtgag
ttcgccaatcaatgtttacaactccagcacctcaagccattactccaaatcgatgctcaa
gcaaactttaatcaaatcaatcaagaactttaccaacagttaaatactttgcatccttgc
ggtatcgataacccagaccccatattctggacacccaatgtccaagttgtagaacagcaa
atagttggcaaaggtcatatcaaagttacgcttagccaaactattaacgctcaacaatat
caatttaaggcgattgcttggcgttggcgcgattattaccctctaccgccacgattagat
attgcttacaaattacgcgagaataattttaatggtaatactagcctggagttggaatta
ctaggtgtgagattagctcagaagcaattggaaccgctcaaccaattacaactgttttat
tcacattcgcctaaacctttaagaactaccttcaagcacaatcaacgtcaatatacttgt
ggggtctatgaaaataactcacttcccgaattgagaattaaaaactcagatggcaaagtt
ttggtcatgcagccaggtagtacaatcggattactgggaactagccgtgaggatgcttta
gaaattgacctatcgttaccgcaatacgattctattattcaagctgctatgcaggcatta
tcagtgctgaatgttgagtcctga
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