Nostoc sp. NIES-3756: NOS3756_42490
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Entry
NOS3756_42490 CDS
T04170
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOS3756_42490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
non03019
]
NOS3756_42490
Messenger RNA biogenesis [BR:
non03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NOS3756_42490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAT55270
LinkDB
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Position
4966535..4968307
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AA seq
590 aa
AA seq
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MVNNETNTSLKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTEAMHGVNIVLPDTTY
LRENRHKIKGMVVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRTVLPRDVVRIGKAFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKFDHTPVDGERF
DIQRLAEHGEKGVLCLLSDSTNSEVPGFTPSEASVFPNLDRVFSQAEGRLFVTTFASSVH
RINMILQLAKKHNRVVTVVGRSMLNLIAHARNLGYIKCEDNLFQPLHTVRGLPDENVLIL
TTGSQGETMAAMTRIANKEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMLQGAKVV
YGREQGIHVSGHGCQEDQKLMLALTRPKFFVPVHGEHRMLVKHSQTAQKMGIPAENMVMI
QNGDVIQLTEDSISVAGKVPSGIELVDTTSSGMVSAKVLQERQRMAEEGIVTIAAAIDWQ
GKLLAKPEIHLRGVVTSVERSLLQKWVQQRIEEILSVRWSEFATTVGEQAEVDWGGLQGT
LERELQRSIRRELQCQPSVTLLMQIPDEPPVKVATDGRRRRTRTAAQVAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaacgaaactaataccagcctaaaaattattcctttgggcggtttacacgaa
attggtaaaaacacctgcgtttttgaatacgatgatgaaataatcctgttagatgcgggg
ttggctttccccacagaggcgatgcacggtgtgaatatcgtcctaccagatacgacctac
ctgcgggaaaatcgccacaaaattaaggggatggttgttacccacggtcatgaagaccat
attggtgggattgcttttcacctcaaacaatttgacattccagtgatttatggacctaga
ctagcaatggcaatgctagagggtaaattggaagaagctggagtacgtgatcgcacagaa
ttaagaacagttttaccccgtgatgtagtccgcatcggtaaagcgttttttgtagagtac
atccgtaacacccactccatcgccgatagcttcaccgtagccattcacacacccttgggt
gtagtgattcatactggagacttcaagtttgaccacaccccagtcgatggtgaaagattt
gatatccaacgtctggcagaacacggcgaaaaaggcgtactgtgtctgttaagtgattct
acaaactccgaagttccaggatttacaccttcggaagcgtcagttttccccaacctagat
agagtatttagtcaagcggaaggacggttatttgtcactacatttgcttccagcgtgcat
cgtatcaacatgattttgcaactggcgaagaagcataaccgtgtggtgacagttgttgga
cgttccatgctgaatttgattgcccatgctcgtaatttgggttatatcaaatgcgaagat
aatttgttccaacccctgcatacagttcgtggtttgccagatgagaacgtgttgattctc
accactggttcccaaggtgaaacaatggcggcaatgacgagaattgccaacaaagaacac
ccccacatcaaaatccgcgaaggtgataccgttgtcttctcggctaaccccattcccgga
aacactatcgccgtagtcaacaccatcgataagttgatgctgcaaggggcaaaagtagtt
tacggtagggaacaagggattcacgtttctggacacggctgtcaggaagaccagaaatta
atgctggcgttaacccgtcccaagttcttcgttcccgtccacggcgaacaccggatgttg
gtaaaacactctcaaacagcgcaaaagatgggtattcccgccgagaatatggtgatgatt
cagaatggggatgttatccaactaactgaagactcgattagtgtggcagggaaagtgcca
tcaggtattgagttggtagacaccacaagttccggtatggtcagtgccaaggttctgcaa
gaacgccaacgtatggcagaagaaggaattgttaccattgcagctgctatcgattggcag
ggtaaattactggctaaaccagagattcacctacgtggtgttgttactagtgtagagcga
tcgctcctgcaaaagtgggtacaacagcgtatagaggagattttgagtgtacgttggtct
gagtttgccactacagtaggtgagcaagctgaagttgattggggtggcttgcaagggact
ttagagcgtgagttacaacgttctattcgtcgtgagttgcaatgtcagccatcggtgact
ttattgatgcaaattcctgatgaacctcctgtgaaagttgctactgatggtagaaggcgg
cggactcggacggctgcgcaggtagcttcgtag
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