Nostoc sp. NIES-3756: NOS3756_47390
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Entry
NOS3756_47390 CDS
T04170
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
non
Nostoc sp. NIES-3756
Brite
KEGG Orthology (KO) [BR:
non00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
non03021
]
NOS3756_47390
Transcription machinery [BR:
non03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NOS3756_47390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
PBECR5
CM_1
Motif
Other DBs
NCBI-ProteinID:
BAT55746
LinkDB
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Position
complement(5542075..5543058)
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AA seq
327 aa
AA seq
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MPTVNTHTEDTNTKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMTLIDAKEDLKS
QLHREPSLPEWADHVHKSETEVKQTVHQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPSPAEIAKELELEPAQIREYLNMARQPVSLDVKVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNTLLAELTPQQREVLALRFGLLDGNEMSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacacccacacagaagacacaaacaccaaattcacggctgatatggtg
cgaacctatctgcgagaaattggtcgtgtacccctgctcacccgtgagcaagagattgtt
tacgggaagcaggtgcagcaaatgatgacgcttatcgatgcaaaagaagatttaaagtcg
caattgcaccgtgagcctagtttaccagagtgggctgaccatgttcacaagtctgaaaca
gaagtgaaacagactgtgcatcaaggtaagcgcgccaagcaaaaaatgattgaagcgaac
ttgcgcttggttgtagctattgccaagaagtaccaaaagcgcaatatggagttccttgat
ttaattcaagaaggaactctagggttagaaagaggcgtagagaaatttgacccaacgagg
ggttacaaattctcaacctacgcttactggtggattcgccaagcgattacccgtgcgatc
gctcaacagggacgtactattaggctccctatccatattaccgagaaactgaacaaaatc
aaaaaagttcagcgcgaattagctcaaactttaggacgttctccctcaccggcagaaatt
gccaaagagttagaactagagccagcacaaattcgtgaatatctgaacatggcacgtcaa
ccagtttccctagatgtgaaagttggtgacaaccaagatacagaactgcaagaaatgctc
gaagatgaaggcccatcaccagagtattacaccactcaagagttcctgcgccaagattta
aacaccttgttagcagaactcacaccccaacagcgagaagttttagccttgcgctttggc
ttactagatgggaacgaaatgtccttggcgaaagtcggcgaaagattaaacctcagccgt
gaacgtgtgcgccaattagaacatcaagcacttgctcatctgcgtcgccgtagagccaat
gttaaagaatacgtcgccagttaa
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