Nocardioides sp. S-1144: FE634_01450
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Entry
FE634_01450 CDS
T06354
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FE634_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_01450
Enzymes [BR:
noo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FE634_01450
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FE634_01450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCW49416
UniProt:
A0A5B7RAV8
LinkDB
All DBs
Position
277051..280431
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AA seq
1126 aa
AA seq
DB search
MSAPRPSARPGPADDMRPFDITAPLPGAGTTLLEASAGTGKTWTIGALVTRYVAEGVARL
EEMLVVTFGRAASQELRERVRAQLVEAERLLAGDPDVPAGGSPFLQQLVDVDAAERGRRH
RRVVEALAGFDAATIATTHQFCSLVLGSLGVAGDTDARARLVEDLDDLVEEVVDDLYLRA
FAFADTAPVFSHAEAMAIARAAVGDPQARLEPADADRGTTVGRRVAFAEKVREEVELRKR
QLGVLSYDDLLSQLAEALESDDSPARVRMRERWSIVLVDEFQDTDPVQWQVLDRAFSGPE
GGATMVLIGDPKQAIYAFRGGDVTTYLQAAETATTQQTLSVNWRSDSALLVGFQELLVGA
RLGHERIVVRPVTAEHAESRLAGAPSSAPFRLRVVRRDAFGKGPRASLPVADVRAHVARD
LALDVRRLLAAGPTFAGEPLEPHHVAVICYRHADLAASQRALHEAGVPAVIAGGGSVFAT
PAAVEWLTLLEALEQPHRSARVRAAALTCFLGRTVAQLATEGDRLTDDVAETLRRWVEVV
DRRGVAAVLEAASAGGLPRRVLAEVGGERRLTDLRHIGEALHEVAQTEHLGLVSLLAWLR
GQVAEGRAGRGTQRTRRLDSDAAAVQLVTIHASKGLQYPVVYLPALADRFVPKPTRPLFH
DAGGARCLDVGGGGPDWADHVARWTDEEAGEWLRLLYVALTRAQSQVVAWWAPTKNAVAS
PLHRLLLRASGETDVPELPPVPPDDAVVALLGAWRDRGGPAPEASVWADPGPDPARDPVG
ALGVRRFGREVDTTWRRTSYSALSNVEAAAAPGVGSEPEQTPKDDEDVEALAEAALEAGA
DHEAAGVASPMADLPVGATFGSLVHAVLEHADPDAPDLRAELRAHVDEQLLRWPVDLDPE
RLAESLVTVCETRLGPAVGGRSLRQVALRDRLRELDFELPLSGGDRDGGGPGRPVLLGDL
APLLREHLPEGDPVRGYADALAVPALGEQALRGYLTGSVDVVLRTVGPDGEPTYVIVDYK
TNWLGPRDEPLTAHSYRPEALDAAMGHSDYPLQALLYAVVLHRFLRWRQPGYDPERHLGG
VLYLYLRGLCGPAAPLVDGAPCGVFVWRPPVALLEATSDLLDGGTR
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccccccgtccctccgcccggcccggcccggccgacgacatgcgtcccttcgac
atcaccgcgccgctgccgggggccggcaccaccctgctcgaggcgagcgccggcaccggc
aagacctggaccatcggcgccctggtcacccgctacgtggccgagggcgtggcccggctc
gaggagatgctcgtggtcaccttcggccgtgcggcgagccaggagctccgcgagcgggtg
cgcgcccagctggtcgaggccgagcggctcctggccggcgaccccgacgtcccggccggg
gggtcgccgttcctgcagcagctcgtcgacgtcgacgccgccgagcgcggccgccggcac
cggcgggtcgtcgaggcgctcgccgggttcgacgccgccacgatcgccacgacgcaccag
ttctgctcgctggtcctcggctcgctcggcgtggccggcgacaccgacgcccgcgcgcgg
ctcgtcgaggacctcgacgacctggtcgaggaggtcgtcgacgacctctacctgcgggcc
ttcgccttcgccgacaccgcgccggtcttcagccacgccgaggcgatggcgatcgcccgc
gcggcggtgggcgacccgcaggcgcgcctcgagccggccgacgccgaccgcggcaccacg
gtcggacgccgcgtcgcgttcgccgagaaggtgcgcgaggaggtcgagctccgcaagcgg
cagctcggcgtgctctcctacgacgacctgctcagccagctcgccgaggccctggagagc
gacgactccccggcccgggtgcggatgcgcgagcgctggtcgatcgtgctcgtcgacgag
ttccaggacaccgacccggtgcagtggcaggtgctcgaccgggccttcagcggtcccgag
ggcggcgccacgatggtgctgatcggcgaccccaagcaggccatctacgccttccgcggc
ggggacgtgaccacctacctccaggccgcggagacggccacgacccagcagaccctctcg
gtcaactggcgcagcgactccgccctgctcgtcggcttccaggagctgctggtcggcgcc
cgcctgggccacgagcggatcgtcgtgcggccggtgaccgccgagcacgccgagtcccgg
ctggccggtgcgccgtcgtccgcgccgttccgcctgcgcgtggtgcgccgcgacgccttc
ggcaagggcccgcgcgcctcgttgccggtcgccgacgtccgggcccacgtcgcgcgcgac
ctcgccctcgacgtgcgccgcctgctcgcggccgggccgaccttcgccggggagccgctc
gagccccaccacgtcgcggtgatctgctaccgccacgccgacctggccgcctcgcagcgc
gcgctgcacgaggccggcgtccccgctgtcatcgccggcggcgggagcgtgttcgccacc
ccggccgcggtcgagtggctcaccctgctcgaggcgctcgagcagccgcaccgcagcgcc
cgcgtgcgggccgccgcgctgacctgcttcctcggcaggaccgtcgcccagctcgccacc
gagggcgaccggctgaccgacgacgtcgccgagaccctgcggcgctgggtcgaggtcgtc
gaccggcgcggcgtggccgccgtcctcgaggcggcctcggccggcgggctcccgcgccgc
gtgctcgcggaggtcggcggggagcggcggctcaccgacctgcgccacatcggcgaggcg
ctccacgaggtcgcccagaccgagcacctcgggctggtctcgctgctcgcctggctgcgc
ggccaggtggccgagggccgggccgggcgtggcacccagcgcacccgccgcctcgactcc
gacgccgcggccgtccagctcgtgacgatccacgcgagcaaggggctgcagtaccccgtg
gtctacctcccggccctggccgaccgcttcgtgccgaagccgacccggccgctgttccac
gacgccggcggcgcccgctgcctcgacgtcggcggcggcgggcccgactgggccgaccac
gtcgcccgctggaccgacgaggaggcaggggagtggctgcggctgctctacgtcgcgctc
acccgcgcccagtcgcaggtcgtggcctggtgggcgccgaccaagaacgccgtcgcctcg
ccgctgcaccgtctcctgctgcgggcctcgggcgagaccgacgtccccgagctcccgccg
gtgccgcccgacgacgccgtcgtggcgctcctcggggcctggcgcgaccgcggcggcccg
gctcccgaggcctcggtgtgggccgaccccggtcccgaccccgcccgcgacccggtcggc
gcactcggcgtgcgccggttcgggcgcgaggtcgacacgacctggcgccgcacgtcgtac
tccgcgctgagcaacgtcgaggccgccgcggcgcccggtgtcggcagcgagcccgagcag
actcccaaggacgacgaggacgtcgaggcgctcgccgaggccgcgctggaggccggcgcc
gaccacgaggccgccggcgtcgcctcgccgatggccgacctgccggtcggggcgaccttc
gggtcgctggtgcacgccgtcctcgagcacgccgaccccgacgcgcccgacctgcgcgcc
gagctgcgcgcccacgtcgacgagcagctgctgcgctggccggtcgacctcgaccccgag
cggctggccgagtccctcgtcaccgtctgcgagacccggctcggccccgccgtcggtggc
cggagcctgcggcaggtcgcgctgcgcgaccggctccgcgagctcgacttcgagctgccg
ctgtccgggggcgaccgcgacggcggcggaccgggccgccccgtcctgctcggcgacctc
gcgccgctgctgcgcgagcacctgcccgagggcgaccccgtccgcggctacgccgacgcg
ctggccgtgccggccctcggggagcaggcgctgcgcggctacctcaccggctccgtcgac
gtcgtcctccgcaccgtcggccccgacggcgagccgacctacgtgatcgtcgactacaag
acgaactggctcggtccccgcgacgagccgctgacggcccactcctaccggcccgaggcg
ctcgacgccgcgatgggccactccgactacccgttgcaggcgctgctgtacgcggtggtg
ctgcaccgcttcctgcgctggcggcagccgggctacgaccccgagcgccacctcggcggc
gtcctgtacctctacctgcggggactctgcggccccgccgcgcccctcgtcgacggcgcc
ccgtgcggggtgttcgtgtggcgcccgccggtcgcgctgctcgaggccacctccgacctg
ctcgacgggggtacccggtga
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