Nocardioides sp. S-1144: FE634_03905
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Entry
FE634_03905 CDS
T06354
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FE634_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noo03021
]
FE634_03905
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_03905
Enzymes [BR:
noo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FE634_03905
Transcription machinery [BR:
noo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FE634_03905
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FE634_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QCW49766
UniProt:
A0A5B7R6F8
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All DBs
Position
791004..792020
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLSEETVGDFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKVDTVL
HEFSTIEGVKEDVTEIILNLKGLVVSSEHDEPVTMYLRKSGAGDVTGADIAPPAGVEVHN
PDLKIATLSDKGKLEMELVVERGRGYVSAVQNKGNDNEIGRMPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKPSILPRDAIASAGKTLVELFGLARELNVEAEGIDIGPSPVD
EQLAADLALPVEDLQLTVRSYNCLKREGIHTVGELISRSEQDLLDIRNFGAKSIDEVKAK
LVEMGLSLKDSAPGFDPHAALAAYGDDDDDAFVEDEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctctcggaagagaccgtcggcgacttccgcagccgc
ttcgtcatcgagcccctcgagcccggcttcggctacacgctcggcaactcgctgcgtcgc
accctgctctcgtcgatccccggtgcctccgtcaccagcatcaaggtcgacaccgtgctc
cacgagttctcgacgatcgagggcgtcaaggaggacgtcaccgagatcatcctgaacctg
aagggcctcgtcgtctcctccgagcacgacgagcccgtcacgatgtacctgcgcaagtcc
ggtgccggcgacgtcaccggtgccgacatcgcgccgccggccggcgtcgaggtccacaac
cccgacctgaagatcgccaccctgtccgacaagggcaagctggagatggagctggtcgtc
gagcgcggtcgcggctacgtgtccgccgtccagaacaagggcaacgacaacgagatcggc
cggatgccggtcgactcgatctacagcccggtcctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctcgtcatcgacgtcgagaccaagccg
tccatcctgccccgcgacgccatcgcgtcggccggcaagacgctggtcgagctcttcggc
ctggcccgtgagctcaacgtcgaggccgagggcatcgacatcggcccctcgcccgtcgac
gagcagctcgccgccgacctcgccctcccggtcgaggacctgcagctgacggtccggtcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcatcagccgctcggag
caggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggccaag
ctggtcgagatgggcctgtccctcaaggacagcgcgcccggcttcgacccgcacgcggcg
ctggccgcctacggcgacgacgacgacgacgccttcgtcgaggacgagcagtactag
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