KEGG   Nocardioides sp. S-1144: FE634_04440
Entry
FE634_04440       CDS       T06354                                 
Name
(GenBank) PDZ domain-containing protein
  KO
K08372  putative serine protease PepD [EC:3.4.21.-]
Organism
noo  Nocardioides sp. S-1144
Pathway
noo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:noo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FE634_04440
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:noo01002]
    FE634_04440
Peptidases and inhibitors [BR:noo01002]
 Serine peptidases
  Family S1: chymotrypsin family
   FE634_04440
SSDB
Motif
Pfam: Trypsin_2 Trypsin PDZ_2 PDZ_6 PDZ Peptidase_S46
Other DBs
NCBI-ProteinID: QCW49849
LinkDB
Position
889197..890636
AA seq 479 aa
MNDHQPGPTSADDGLDADTDPGTDPGADSGAEATLPLSLDAGRHVADPAGDAVPVTDAVP
GPVPGPVPGPAQGPVPQWTPPSGPLPAAPDRPWHDYAGTTYPMPLGPGPIPARSSRPSGW
IWPVVAVIALVVGLLGGIAGAAVHDQAADDSAPERYAGLDDDAIVELPPVETGGVTAVAE
AVLPSTVQIIAELDGNPQGATGSGFVIDVDGHIVTNNHVVESAAENDGPVQVVDQQGDTY
DAEIVGRSPVYDIAVLQVPDDADLEPAALGTTEGLRVGDGVVAIGSPLGLSATVTAGIVS
ALNRPVTTGTPGDDSSYINAVQTDAAINPGNSGGPLVNLRGQVVGVNSAIATSGGATNGE
AGNIGVGFAIPVEQVRITADQILQTGEARYPVIGAQVGGNGGTGVSGAFLSKVTDGTPAD
DAGLEDGDVVVEVDGMRVVDGISLIVNIRTHQPGDTVDFVFVRDGKERTASITLDSEVG
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgaacgaccaccagccgggcccgacgagcgccgacgacggcctcgacgccgacaccgac
cccggcaccgaccccggcgctgactccggcgccgaggcgaccctgccgttgtcgctcgac
gccgggcggcacgtcgccgaccccgccggcgacgccgtcccggtgacggacgccgtgccc
ggacccgtccccggtccggtgccggggcccgcgcagggtcccgtgccgcagtggacgccg
ccgtccggaccgctgcccgccgcccccgaccggccgtggcacgactacgccggcacgacg
tacccgatgccgctcggcccgggcccgatccccgcccgctcctcgcggcccagcggctgg
atctggccggtggtcgcggtcatcgctctcgtcgtcgggctcctcggcggcatcgccggg
gcggccgtccacgaccaggccgccgacgacagcgcgcccgagcgctacgccggcctcgac
gacgacgcgatcgtcgagctgccgccggtcgagaccggcggcgtcaccgcggtcgccgag
gcggtgttgccgagcacggtgcagatcatcgccgagctcgacgggaacccgcagggggcc
acgggctccggcttcgtgatcgacgtcgacggccacatcgtcaccaacaaccacgtcgtc
gagtcggccgccgagaacgacggcccggtccaggtcgtcgaccagcagggcgacacctac
gacgccgagatcgtcggccgcagcccggtctacgacatcgcggtgctccaggtgcccgac
gacgccgacctcgagccggccgcgctcggcaccaccgaggggctgcgcgtcggcgacggc
gtcgtggccatcggctcgccgctcgggctcagcgccaccgtcaccgccggcatcgtcagc
gccctcaaccgccccgtcaccaccgggacgccgggcgacgactcctcctacatcaacgcc
gtccagaccgatgcggccatcaaccccggcaactccggcggcccgctggtcaacctgcgc
ggccaggtcgtcggggtgaactcggccatcgcgacgtcgggcggcgccaccaacggcgag
gccggcaacatcggcgtcgggttcgcgatcccggtcgagcaggtccggatcaccgccgac
cagatcctccagaccggcgaggcccgctacccggtcatcggcgcccaggtcggcggcaac
ggcggcaccggcgtctccggcgccttcctctccaaggtgaccgacgggacgccggccgac
gacgccgggctcgaggacggcgacgtcgtcgtcgaggtcgacggcatgcgcgtcgtcgac
gggatctcgctgatcgtcaacatccgcacccaccagcccggggacaccgtcgacttcgtc
ttcgtccgcgacggcaaggagcgcaccgcgtcgatcaccctcgactccgaggtgggttga

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