Nocardioides sp. S-1144: FE634_07715
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Entry
FE634_07715 CDS
T06354
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03420
Nucleotide excision repair
noo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FE634_07715
03430 Mismatch repair
FE634_07715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_07715
Enzymes [BR:
noo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE634_07715
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE634_07715
MMR (mismatch excision repair)
Other MMR factors
FE634_07715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
HRDC
AAA_19
UvrD_C_2
Viral_helicase1
PRAS_NT
DUF5558
C1_1
DZR
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QCW50322
UniProt:
A0A5B7RD53
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All DBs
Position
1588435..1590489
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AA seq
684 aa
AA seq
DB search
MPPSSDDLLSALDPEQREVAETLRGPVRVLAGAGTGKTRAITHRIAHGVASGVYVPTEVL
AVTFTTRAAGEMRARLRRLGAPTVQARTFHSAALRQLRYFWPHVHGTELPTLVESKIPIV
VGAARQLRMRTDQAMLRDLASEIEWAKVSNVRPDDYVEVAAARGRSVAQLEADQVARVIG
AYEDVKREQGRMDMEDVLLLTAGVLAEDERVAAQVRRQYKWFVVDEFQDVSPLQSALLDL
WLGGRDELCVVGDPAQTIYSFAGANADYLRDFPRKHAGTTSIELVRNYRSTPQVVGAANT
LLAGTGSTSVQLRAQRPAGAAVTYTGHPDEVAEATDVAGRVAALRSAGRPLSEIAVLFRI
NAQSEAYEEALTEAKIPYVIRGAARFFDRPEVREAVTRLRGAARSGAQAADGDTWVDLVR
DTLAGMGWTTEAPTARGQTRDRWESWQALVSQAEAFAGEAASGGDGGLNAFVDDLDRRAA
EQHAPVAEGVTLATFHAAKGLEWDSVFLVGLQDGTLPITYAQTPAAIEEERRLLYVGMTR
ARVDLAVSWAAARNPGQAARRKPSRFLDPLLPDSARPVARGKARAKGARTCVECGKPLST
AERTRSRCSDCPVPYDEALFERLREWRKQRAAEEEIAAFMVFSNATLEAVAERRPTTPKA
LLAISGVGPEKLEKYGQELLELVS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgtccagcgacgacctgctctccgcgctcgaccccgagcagcgcgaggtcgcc
gagacgctgcgcggtccggtccgggtgctcgccggtgccggcaccggcaagacccgcgcg
atcacccaccgcatcgcccacggcgtcgcctccggcgtgtacgtgcccaccgaggtgctc
gcggtcaccttcaccacccgggcggccggcgagatgcgcgcccggctgcgccggctgggc
gcaccgacggtgcaggcccgcaccttccactccgccgcgctgcgccagctgcgctacttc
tggccgcacgtccacggcaccgagctgccgacgctggtggagtcgaagatcccgatcgtg
gtcggggccgcccgccagctgcggatgcgcaccgaccaggcgatgctgcgcgacctcgcc
tccgagatcgagtgggccaaggtgagcaacgtgcgccccgacgactacgtcgaggtcgcc
gcggcgcgcggccggagcgtcgcccagctcgaggccgaccaggtcgcgcgggtcatcggc
gcctacgaggacgtcaagcgcgagcagggccggatggacatggaggacgtcctgctgctc
accgccggcgtgctcgccgaggacgagcgggtggccgcccaggtccgccgccagtacaag
tggttcgtcgtcgacgagttccaggacgtctcgccgctgcagtcggcgttgctcgacctg
tggctcggcgggcgcgacgagctctgcgtcgtcggcgaccccgcccagacgatctactcc
ttcgccggcgccaacgccgactacctgcgcgacttcccgcgcaagcacgccggcaccacc
tccatcgagctggtccgcaactaccgctcgaccccgcaggtcgtcggcgccgccaacacc
ctgctcgccggcaccgggagcaccagcgtccagctccgcgcacagcggcccgccggagcc
gcggtgacctacaccggtcaccccgacgaggtcgccgaggccaccgacgtcgccggccgg
gtggcggcgctgcgctcggccggtcgtccgctgtcggagatcgcggtgctgttccgcatc
aacgcccagtccgaggcctacgaggaggccctgacggaggcgaagatcccctacgtcatc
cgcggcgccgcccggttcttcgaccgtcccgaggtccgcgaggccgtcacccgcctgcgc
ggggccgcccgctccggcgcccaggcggccgacggcgacacgtgggtcgacctggtccgc
gacacgctcgccggcatgggctggacgaccgaggctcccacggcccgcggccagacccgc
gaccgctgggagtcgtggcaggcgctggtcagccaggccgaggccttcgcgggcgaggcc
gcgtccgggggcgacggggggctcaacgccttcgtcgacgacctcgaccgccgcgctgcc
gagcagcacgcgccggtcgccgagggcgtcaccctggccaccttccacgccgccaagggc
ctcgagtgggactcggtgttcctcgtcggcctccaggacggcaccctgccgatcacctac
gcccagacgccggcggcgatcgaggaggagcgccgactgctctacgtcggcatgacccgg
gcccgggtcgacctcgccgtctcgtgggccgcggcgcgcaaccccggccaggcggcgcgg
cgcaagccgtcgcggttcctcgacccgctgctgcccgactccgcgcgcccggtcgcccgc
ggcaaggccagggcgaagggcgcgcgcacctgcgtcgagtgcggcaagccgctgtcgacg
gccgagcgcacccggtcgcgatgctccgactgcccggtgccctacgacgaggcgctgttc
gagcggttgcgcgagtggcgcaagcagcgggccgcggaggaggagatcgcggcgttcatg
gtcttcagcaacgccaccctggaggccgtcgccgagcgccgtccgacgacgccgaaggcg
ctgctcgcgatcagcggcgtggggcccgagaagctcgagaagtacggccaggagctcctc
gagctggtctcctga
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