Nocardioides sp. S-1144: FE634_08065
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Entry
FE634_08065 CDS
T06354
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
noo
Nocardioides sp. S-1144
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noo03021
]
FE634_08065
Transcription machinery [BR:
noo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FE634_08065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_Crp_2
MarR
Sigma70_ECF
HTH_26
MarR_2
DUF7343
HTH_24
KORA
Phage_antitermQ
HTH_10
HTH_19
HNF-1_N
LacI
HTH_37
PLN_propep
Motif
Other DBs
NCBI-ProteinID:
QCW50374
UniProt:
A0A5B7RDA1
LinkDB
All DBs
Position
complement(1661688..1662590)
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AA seq
300 aa
AA seq
DB search
MDSSAPRDGSTSPPDPPRPAPDRPDPSVETEDVVQPTPAEARLTRVEATRRRSAELFVEL
RDDLGSEASRAQARDDLVHLHLPLVEHCARRFRNRGEPFEDLVQVGTIGLIKSVDRFDTE
RGVEFSTYATPTIIGEIKRYFRDKGWAIRVPRRLQELRMQISAASAELTQSLGRSPTPRE
LAETIGCTVEEIVEGIESSNAYSTLSLDASDDSDEGGSSMLDAIGVEDEGLEHVEIRESI
KPLLEQLAPREKRILLLRFFKNMTQSQIAEEIGVSQMHVSRLLNRTLEQLRTSLEAPDPE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctgctcctcgggacggcagcacctcaccgcccgaccctccccggcccgcc
cccgaccggcccgacccgtcggtcgagaccgaggacgtcgtccagccgacgcccgccgag
gcccggctcacccgcgtcgaggccacccgcaggcgcagcgccgagctgttcgtcgagctg
cgcgacgacctcggctccgaggcctcccgcgcccaggcccgcgacgacctcgtgcacctg
cacctgccgctcgtcgagcactgcgcgcggcgcttccgcaaccgcggcgagcccttcgag
gacctcgtccaggtcggcacgatcggcctgatcaagtcggtcgaccggttcgacaccgag
cgcggcgtggagttctcgacctacgcgacgccgaccatcatcggcgagatcaagcggtac
ttccgcgacaagggctgggcgatccgggtccctcggcgcctgcaggagctgcggatgcag
atcagcgcggcctcggccgagctgacccagagcctggggcgctcccccaccccgcgcgag
ctggccgagaccatcggctgcacggtcgaggagatcgtggagggcatcgagtcgagcaac
gcctactcgacgctctccctcgacgccagcgacgactccgacgagggcgggtcgagcatg
ctcgacgcgatcggcgtcgaggacgagggcctcgagcacgtcgagatccgcgagtcgatc
aagccgctgctcgagcagctcgcgccgcgcgagaagcggatcctgctgctccggttcttc
aagaacatgacgcagtcccagatcgccgaggagatcggtgtctcgcagatgcacgtctcc
cggctgctcaaccggaccctcgagcagctgcgcacctcgctcgaggcgcccgaccccgag
tag
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