Nocardioides sp. S-1144: FE634_08700
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Entry
FE634_08700 CDS
T06354
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03030
DNA replication
noo03410
Base excision repair
noo03420
Nucleotide excision repair
noo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE634_08700 (polA)
03410 Base excision repair
FE634_08700 (polA)
03420 Nucleotide excision repair
FE634_08700 (polA)
03440 Homologous recombination
FE634_08700 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noo03032
]
FE634_08700 (polA)
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_08700 (polA)
Enzymes [BR:
noo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE634_08700 (polA)
DNA replication proteins [BR:
noo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FE634_08700 (polA)
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FE634_08700 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE634_08700 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
HHH
Motif
Other DBs
NCBI-ProteinID:
QCW50465
UniProt:
A0A5B7R8B2
LinkDB
All DBs
Position
1786469..1789159
Genome browser
AA seq
896 aa
AA seq
DB search
MTEAPTAPTGDRPRLLLLDGHSLAYRAFFALPVENFSTKTGQFTNAVFGFTSMLINVLRD
ERPTHLAVAFDVSRQTFRMEEYAEYKAKRQKSPTEFSSQLPLIEEVLDALRIPFLKKPGF
EADDIIATLVTQALADDMDVLVLTGDRDALQLVTEHSTILYPTRGVSELARMTPEAVESK
YGVTPDRYPELAALVGEDSDNLPGIPGVGPKTAAKWLALYDGLDNVITRADEVKGKAGEN
LRAHLADVMRNRRLNALVRDLELDLLPSQMARQAWDRQEVHTLFDGLEFRVLRNRLFEEI
ESTEVLEEGGFELEGQALEPGAVAAWLAELGGERTGLHVRGAWGAGTGRVDGIGFATATG
RSAYVDATALTPDDDAALARWLTDADRPKVLHDAKGPELALAAHGWALRGVVSDTALAAY
LARPDQRSYDLADLTVRYLKRELRQELDETDQGLLFDTGTDVAGPAMLHARAVLDLAEAL
DVELEERGGTRLLAEVELPLVHLLAHMEQTGIAVDGDHLETLQGEFDTEVRAAAQAAYDV
IGREINLGSPKQLQVLLFDELEMPKTKRTKTGYTTDADALQQLYVKTEHPFLAHLLRHRD
VIRLRQTIEGLLKTVQPDGRIHTTFNQTIAATGRLSSTDPNLQNIPIRTEEGRRIREGFV
VAEGQECLMTADYSQIEMRIMAHLSDDQLLIEAFRSGRDFHSITAARVFDVPADEVSVEQ
RAKIKAMNYGLAYGLSAFGLGQQLGIEPGEARGLMDEYFETFGGIRDYLQGVVGQARKDD
YTETIMGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADLIKVAMLRTQAAIEASDLR
SRMLLQVHDELVFEVAPGETEALEALVRAQMAGAADLTVPLDVSVGTGHSWHDAAH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggcacccactgcacccaccggcgaccgcccgcgactgctcctgctcgacggc
cactcgctggcctaccgcgccttcttcgcgctgccggtcgagaacttctcgaccaagacc
gggcagttcaccaacgcggtcttcgggttcacctcgatgctcatcaacgtgctgcgcgac
gagcggcccacccacctcgcggtcgccttcgacgtgtcgcggcagaccttccgcatggag
gagtacgccgagtacaaggcgaagcgccagaagtcgcccaccgagttcagcagccagctg
ccgctcatcgaggaggtgctcgacgcgctgcgcatcccgttcctgaagaagccgggcttc
gaggccgacgacatcatcgccaccctcgtcacccaggcgctggccgacgacatggacgtg
ctcgtcctcaccggcgaccgcgacgcactccagctggtcaccgagcactccacgatcctc
tacccgacccgcggtgtctccgagctggcccggatgacccccgaggccgtcgagtccaag
tacggcgtcacgcccgaccgctaccccgagctcgccgccctggtcggggaggactccgac
aacctgcccggcatcccgggggtggggcccaagaccgccgccaagtggctggccctctac
gacggcctcgacaacgtgatcacccgcgccgacgaggtcaagggcaaggccggggagaac
ctgcgcgcccacctcgccgacgtgatgcgcaaccggcggctcaacgcgctggtgcgcgac
ctcgagctcgacctgctgccctcgcagatggcccgccaggcgtgggaccgccaggaggtg
cacaccctcttcgacggcctcgagttccgggtcctgcgcaaccggctcttcgaggagatc
gagtccaccgaggtgctcgaggagggtggcttcgagctcgaggggcaggccctcgagccg
ggcgccgtcgcggcgtggctggccgagctcggcggcgagcgcaccgggctgcacgtccgt
ggggcgtggggcgccggcaccggccgggtcgacgggatcgggttcgccaccgcgaccggc
cgctcggcctacgtcgacgccaccgccctgacccccgacgacgacgccgccctggcccgg
tggctcaccgacgccgaccggcccaaggtcctgcacgacgcgaagggccccgagctggcc
ctcgcggcacacggctgggcgctgcgcggcgtggtcagcgacaccgccctggcggcctac
ctcgcgcgccccgaccagcgctcctacgacctggccgacctcaccgtgcgctacctcaag
cgcgagctcaggcaggagctcgacgagaccgaccagggcctgctcttcgacaccggcacc
gacgtggccgggccggccatgctgcacgcccgcgccgtcctcgacctcgccgaggccctc
gacgtcgagcttgaggagcgcggcggcacccggctgctcgcggaggtcgagctgccgctg
gtgcacctgctcgcgcacatggagcagaccggcatcgccgtcgacggcgaccacctcgag
acgctgcagggcgagttcgacaccgaggtgcgcgccgccgcgcaggccgcctacgacgtc
atcggccgcgagatcaacctcggctcgcccaagcagctgcaggtgctgctcttcgacgag
ctcgagatgccgaagaccaagcggaccaagaccggctacaccaccgacgccgacgcgctg
cagcagctctacgtcaagaccgagcacccgttcctggcccacctgctgcgccaccgcgac
gtgatccggctgcgccagaccatcgaggggctgctcaagaccgtccagcccgacggccgg
atccacaccacgttcaaccagacgatcgcggccaccggccggctctccagcaccgacccg
aacctgcagaacatcccgatccgcaccgaggagggacgccgcatccgcgagggcttcgtg
gtcgccgagggccaggagtgcctgatgacggccgactacagccagatcgagatgcggatc
atggcccacctgtccgacgaccagctcctcatcgaggcgttccggtccggtcgcgacttc
cactcgatcaccgcggcccgcgtcttcgacgtcccggccgacgaggtgagcgtcgagcag
cgcgcgaagatcaaggcgatgaactacgggctggcctacgggctgtcggcgttcgggctc
ggtcagcagctcggcatcgagccgggcgaggcccggggcctgatggatgagtacttcgag
accttcggcggcatccgcgactacctccagggcgtcgtgggccaggcccgcaaggacgac
tacaccgagaccatcatggggcgccggcgctacctgcccgacctcaacagcgacaaccgg
cagcggcgcgagatggccgagcggatggcgctcaacgccccgatccagggctcggcggcc
gacctcatcaaggtcgcgatgctccgcacccaggccgcgatcgaggccagcgacctgcgc
tcgcggatgctgctgcaggtccacgacgagctcgtcttcgaggtcgcccctggcgagacc
gaggcgctcgaggcgctggtccgcgcgcagatggccggcgccgccgacctcaccgtgccg
ctcgacgtctccgtcggcaccggccactcctggcacgacgcggcgcactga
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