Nocardioides sp. S-1144: FE634_09180
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Entry
FE634_09180 CDS
T06354
Name
(GenBank) DEAD/DEAH box helicase
Organism
noo
Nocardioides sp. S-1144
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
QCW50540
UniProt:
A0A5B7R8I1
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Position
complement(1897938..1901153)
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AA seq
1071 aa
AA seq
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MDDDMDLLRQLIHEHLDGLFDRGTLHRAQVYVDERLVSAPTIVAESETHLTATARVHSSG
GAPYLTRLTVRLAPGVLDLSTICSCPVRFDCKHGAALAMVLAAGSDEPVADDWRHRLDVL
LDELGDLAPPAVDPTPLALQLTWGVSHDRYRYSQAPDLRLRPMRLGKRGRWIKSGIGWSD
LPGARVRREHLAAHLDVLASMASGLERHGGYWYAGREPSAGDFGPDVVPLLVEARSAGVR
LLLEGVDVVDLVDKPVAPVADLSAGHPADATGDGTTRLVVGLDHDGRVWHGDRVRFWGEP
AHTALLHTGEGAIALARLARRLPRGPVRAITGDPLEIPVGAAGELATGVERLRRLVPLGS
RDGSVEVPEPVRPRLRLTVVWHGADRADLAWSWRYGEHDVALDQPDAVRDHRAERDLLAA
LPQPPDTGRHEVSGVDALHLTLLELPSWRDCDDVDVVEVGAPSLRESVAEPEIRFDVAPP
GDAALAATTDWLDLAVSITVDGEHVPLAAVLAALTLGDELVILPSGLFFSTDRPEFARLA
ALVHDAATLRERDDDDDRISVGQHDLGTWAELADLGVVDDQAEEWVRRARALRDLVDLPR
PEPTGVVSTLRGYQRDGFHWLAFLWQHGLGGILADDMGLGKTLQVLTLVAHARATDPTAR
PFLVVAPTSVVPGWVDEAARHTPGLRVRAVSASAARRPETIAELAADADVVVTSYTLLRL
DGDDYAAVAWEGLVLDEAQQVKNHRSKAYGVVRRIDARFRVAVTGTPFENRLLELWSLLS
IVAPGIYPHPRSFVEHVVRPVEDDGDEAALRRFTQRIKPFVLRRTKELVAADLPPKQEQV
LTVELTPRHRKVYDTHLAKERQRILGLVDADFDGNRVAILAALTKLRQLALDPALVDEAH
GELGSAKLDLLLDHVHELVAEGHRALVFSSFTGYLRRVRDRLAAEGVATTYLDGSTTERA
AVIDRFRQGDAPVFLISLKAGGTGLTLTEADYVFVLDPWWNPAAEAQAVDRAHRIGQERT
VMVYRLVADDTIEDKVMALKERKAALFARVVDGEGTTARAIDADDIRALFD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacatggacctcctgcgccagctcatccacgagcacctcgacggactcttc
gaccggggcacgctgcaccgcgcccaggtctacgtcgacgagcgactggtgtcggccccc
acgatcgtggcggagtcggagacgcacctcaccgccaccgctcgggtgcactcctccggc
ggcgcgccgtacctgacccgcctcaccgtccggctggctcccggcgtcctcgacctgtcg
accatctgcagctgcccggtgcgcttcgactgcaagcacggcgccgcgctggcgatggtg
ctggccgcggggtccgacgagccggtcgccgacgactggcgccaccgcctcgacgtcctg
ctcgacgagctcggcgacctcgccccgcccgcggtcgacccgacgccgctcgcactccag
ctgacctggggggtcagccacgaccgctaccgctactcgcaggcgcccgacctccgcctg
cgcccgatgcggctggggaagcgcggccggtggatcaagtccggcatcgggtggtccgac
ctcccgggcgcgcgggtgcggcgcgagcacctggccgcgcacctcgacgtcctggcctcg
atggcgagcgggctcgagcggcacggcggctactggtacgccggacgcgagccgagcgcg
ggcgacttcgggcccgacgtcgtccccctgctcgtcgaggcccgctcggccggcgtccgg
ctgctgctcgagggcgtcgacgtcgtcgacctggtcgacaagccggtggccccggtcgcc
gacctgtccgccggccaccccgccgacgccaccggtgacggcacgacccggctggtggtc
ggtctcgaccacgacggccgggtctggcacggcgaccgcgtccggttctggggcgagccc
gcccacaccgccctcctgcacaccggcgagggcgccatcgcgctggcgcgcctcgcgcgg
cgcctgccccgtggcccggtccgcgccatcaccggcgacccgctcgagatcccggtcggc
gccgcgggcgagctggccacgggggtcgagcgactgcggcgcctggtgccgctcgggtcc
cgcgacggcagcgtcgaggtgccggagccggtccgtccgcgcctccggctcaccgtcgtc
tggcacggcgccgaccgggccgacctcgcctggtcgtggcgctacggcgagcacgacgtc
gccctcgaccagcccgacgccgtccgcgaccaccgcgccgagcgcgacctgctcgccgcg
ctcccccagccccccgacaccgggcgccacgaggtcagcggcgtcgacgccctgcacctc
accctgctcgagctcccgtcctggcgcgactgcgacgacgtcgacgtggtggaggtcggt
gcgcccagcctccgggagtcggtcgcggagcccgagatccgcttcgacgtcgcgcccccc
ggcgacgccgcgctcgccgccaccaccgactggctcgacctcgcggtctccatcaccgtc
gacggcgagcacgtgccgctggccgccgtcctggccgcgctcaccctgggcgacgagctg
gtgatcctcccgagcggcctgttcttcagcaccgaccggcccgagttcgcccggctcgcc
gccctcgtccacgacgccgccacgctgcgcgagcgcgacgacgacgacgaccggatcagc
gtcggccagcacgacctcggcacgtgggccgagctcgccgacctcggcgtggtcgacgac
caggccgaggagtgggtgcgccgcgcgcgggccctgcgcgacctggtcgacctgccgcgt
cccgagcccacgggcgtggtctccacgctgcgcggctaccagcgcgacggcttccactgg
ctcgccttcctctggcagcacgggctcggcgggatcctcgccgacgacatgggcctcggg
aagaccctccaggtgctcaccctggtggcccacgcccgcgccaccgaccccaccgcacgc
ccgttcctcgtcgtggcaccgaccagcgtcgtgcccggctgggtcgacgaggccgcacgc
cacaccccgggactccgggtgcgcgcggtctcggcgtccgcggcccgccgccccgagacc
atcgccgagctcgccgccgacgccgacgtcgtggtcaccagctacaccctgctccgcctc
gacggcgacgactacgccgccgtcgcctgggagggcctggtgctcgacgaggcccagcag
gtgaagaaccaccggagcaaggcctacggcgtggtgcggcgcatcgacgcccggttccgc
gtggcggtcaccggcaccccgttcgagaaccgcctgctcgagctgtggtcgctgctgtcc
atcgtcgccccgggcatctacccccacccccgctcgttcgtcgagcacgtcgtccgcccg
gtcgaggacgacggcgacgaggccgcgctgcgccgcttcacccagcgcatcaagcccttc
gtgctgcgccgcaccaaggagctggtcgccgccgacctcccgcccaagcaggagcaggtg
ctgaccgtcgagctcaccccgcgccaccgcaaggtctacgacacccacctggccaaggag
cggcagcgcatcctcggcctggtcgacgccgacttcgacggcaaccgggtcgccatcctc
gcggcgctcaccaagctgcgccagctcgcgctcgaccccgcgctggtcgacgaggcccac
ggcgagctcggctcggccaagctcgacctgctcctcgaccacgtccacgagctcgtcgcc
gagggccaccgcgcgctggtgttctcctccttcaccggctacctccgccgggtgcgcgac
cggttggccgccgagggcgtcgcgaccacctacctcgacggctcgaccaccgagcgggcc
gcggtgatcgaccggttccggcagggcgacgccccggtcttcctcatcagcctcaaggcc
ggcggcaccgggctcaccctcaccgaggccgactacgtcttcgtgctcgacccctggtgg
aaccccgccgccgaggcccaggccgtcgaccgggcgcaccgcatcggtcaggagcggacc
gtgatggtctaccggctcgtcgccgacgacaccatcgaggacaaggtgatggccctcaag
gagcgcaaggccgccctgttcgcccgggtcgtcgacggcgagggcaccacggcacgggcg
atcgacgccgacgacatccgcgccctcttcgactga
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