Nocardioides sp. S-1144: FE634_10725
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Entry
FE634_10725 CDS
T06354
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
noo
Nocardioides sp. S-1144
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_10725
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FE634_10725
Archaeal homologous recombinant proteins
FE634_10725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QDH10908
UniProt:
A0A5B8EMB0
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All DBs
Position
2218758..2221739
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AA seq
993 aa
AA seq
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MRLHRLEIQAFGPFAGAASIDFDDLSEAGLFLLSGATGAGKTSVLDAVCFALYGDVPGDR
SQAKRLRSDQADATTPPRVTLEATLAGRRFRIVRSPAWERPKKRGAGTTTEPAKVTVSER
VGPDWQPLSSRLDETGDLVVRLLGLDLTQFTQVAMLPQGRFQAFLRARSDERHRLLQQLF
RTGRFEAVERWLRERRIALGHESAAGHQRVADVVSRVSEAAAAPLPDGVDVHDLAPAVDD
DTLRGWVEACLAEAVSAREESQERLAAAGVEEQATRVSLEAARADVARRERLVAARRERD
ALLDRTPAHRADRARLDAARRAAVVVPWHHQAGAAGAAATRATAAADAALGAVADRLGEV
PRTERLPALADRALAAAAEARAQRPHADRLAAVRRALRDNDDRRAQLADDLGRVQHERAV
RPDRLAVLRADVAHARDDTRRVDVLTASAQDARSRLDAHEEVVVLRARVQEVRERWLETR
EQTFVLKDALLAVQRLRLDGMAAELAVALVVGGCCPVCGSGEHPAKARPAPGAPDAATEK
AALNAVADAEVVEHALDQQVRELEQSLAAAEARVGDDPVTDLAERLGSLQDALAAALRSS
GRLPELEARLSTDERALVDLEHRCDEILAADFRLAGERGGLTQEEATLGAQLAAVLGDHA
DLDAVHEAHRRTAELCRAADRAAEEARAAADGRLEADRAVAVAVSDAGFDHLADALAATL
EPGALRALDGAVTRHERRLEAVTEVLRDAGPDDAAPLPDVELLDRRHVEAQARVRAAAAD
VSRYSARTERLAGLLDTLDDELAAWAPVRRDHGVVARLSAFVEGKSADNLLKMRLSAYVL
AYRLSQVVAAANERLARMSDQRYSLEHTGQRGAGESRGGLSLLVRDDWSGESRDPATLSG
GETFVVSLALALGLADVISHEAGGATLDTLFVDEGFGSLDADTLDDVMDTLDSLRDGGRV
VGVVSHVAEMRDRIPTQLHVAKHRRGSTVSLRR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcaccgactggagatccaggcgttcggcccgttcgccggcgccgcgagcatc
gacttcgacgacctgtccgaggccgggctgttcctgctgtccggggccaccggcgccggc
aagaccagcgtcctcgacgccgtctgcttcgcgctgtacggcgacgtgcccggcgaccgc
agccaggccaagcggctgcgctccgaccaggccgacgccaccacgccgccgcgggtcaca
ctggaggccacgctcgcgggacgccgcttccgcatcgtgcgctcccccgcctgggagcgc
cccaagaagcgcggcgccggcaccaccaccgaacccgccaaggtcacggtctcggagcgg
gtcggccccgactggcagccgctgtcgagccggctcgacgagaccggcgacctcgtcgtc
cggctgctcgggctcgacctcacccagttcacccaggtcgcgatgctgccgcagggccgc
ttccaggccttcctgcgcgcccgctccgacgagcggcaccgcctgctgcagcagctcttc
cgcaccggccgcttcgaggcggtggagcgctggctgcgcgagcgccggatcgccctgggc
cacgagtccgccgcggggcaccagcgggtcgccgacgtcgtcagccgggtcagcgaggcc
gccgccgccccgctgcccgacggcgtcgacgtccacgacctggcgccggccgtcgacgac
gacacgctgcgagggtgggtcgaggcctgcctggccgaggcggtgtccgcgcgtgaggag
tcgcaggagcgcctcgccgcggccggggtcgaggagcaggccacccgggtcagtctcgag
gccgcccgcgccgacgtcgcccgccgcgagcgtctcgtcgccgcgcgccgcgagcgcgac
gcgctcctcgaccgcaccccggcccaccgcgccgaccgggcgcgcctcgatgcggcccgc
cgcgccgccgtcgtggtcccgtggcaccaccaggccggcgccgcgggcgccgccgcgacc
cgcgccacggccgctgccgacgccgccctcggtgccgtggccgaccggctcggtgaggtc
ccccgcaccgagcggctccccgccctcgccgaccgggccctcgccgccgcggccgaggcc
cgggcccagcgaccgcacgccgaccggctcgccgccgtccggcgcgcgctgcgcgacaac
gacgaccggcgcgcccagctcgccgacgatctcggccgggtgcagcacgagcgcgcggtg
cgtcccgaccggctcgcggtgctgcgcgccgacgtcgcccacgcgcgcgacgacacccgc
cgggtcgacgtcctcacggcgtccgcccaggacgcccggtcccgtctcgacgcccacgag
gaggtcgtcgtgctccgcgcccgggtccaggaggtgcgcgagcgctggctcgagacccgc
gagcagaccttcgtgctcaaggacgcgctgctcgccgtccagcggctgcgtctcgacggc
atggccgccgagctcgccgtggccctggtcgtcggcggctgctgcccggtctgcgggtcg
ggcgagcaccccgcgaaggcgcggccggcccccggcgcgcccgacgccgccaccgagaag
gccgccctcaacgccgtggccgacgccgaggtcgtcgagcacgccctcgaccagcaggtg
cgcgagctggagcagtcgctcgccgcggccgaggcgcgcgtgggcgacgacccggtcacc
gacctcgccgagcggctcggctcgctgcaggacgcgctcgccgcggccctgcgctcatcc
ggccggctgcccgagctggaggcgaggctgagcaccgacgagcgcgccctggtcgacctc
gagcaccggtgcgacgagatcctcgccgccgacttccgcctcgccggcgagcgcggcggg
ctgacgcaggaggaggcgacgctcggcgcccagctcgccgccgtcctcggcgaccacgcc
gacctcgacgccgtccacgaggcgcaccggcgcaccgccgagctgtgccgggccgccgac
cgggccgccgaggaggcgcgcgccgccgccgacggccggctcgaggccgaccgggccgtc
gccgtggcggtctccgacgccggcttcgaccacctcgccgacgcgctggccgcgacgctg
gagccgggggcgctgcgcgccctcgacggggccgtgacccggcacgagcgccggctggag
gccgtcaccgaggtgctgcgcgacgccggccccgacgacgccgcgccgctgcccgacgtc
gagctcctggaccgccggcacgtagaggcccaggcgcgggtccgggcggcggcggccgac
gtcagccgctactcggcgcgcaccgaacggctcgcgggcctgctcgacaccctcgacgac
gagctggcggcctgggcgccggtccggcgcgaccacggggtcgtggcccggctctcggcg
ttcgtcgagggcaagtcggccgacaacctgctgaagatgcggctctcggcctacgtgctg
gcctaccggctctcgcaggtcgtcgcggcggccaacgagcggctcgcccggatgagcgac
cagcgctactccctcgaacacaccggccagcggggcgcgggcgagtcccgcggcggactc
agcctgctcgtgcgcgacgactggtcgggcgagtcacgtgaccccgcgaccctgtcgggc
ggggagaccttcgtggtctccctcgccctcgcgctcgggctggccgacgtcatctcgcac
gaggccggcggcgcgacgctcgacacgctcttcgtcgacgagggcttcgggtcgctcgac
gccgacaccctcgacgacgtcatggacaccctcgactcgctgcgcgacgggggccgggtc
gtgggcgtcgtcagccacgtggcggagatgcgcgaccggatccccacccagctgcacgtg
gccaagcaccggcgcggctcgacggtgagcctgcgccggtag
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