KEGG   Nocardioides sp. S-1144: FE634_10725
Entry
FE634_10725       CDS       T06354                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
noo  Nocardioides sp. S-1144
Brite
KEGG Orthology (KO) [BR:noo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noo03400]
    FE634_10725
DNA repair and recombination proteins [BR:noo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FE634_10725
    Archaeal homologous recombinant proteins
     FE634_10725
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_27 AAA_29 AAA_15
Other DBs
NCBI-ProteinID: QDH10908
UniProt: A0A5B8EMB0
LinkDB
Position
2218758..2221739
AA seq 993 aa
MRLHRLEIQAFGPFAGAASIDFDDLSEAGLFLLSGATGAGKTSVLDAVCFALYGDVPGDR
SQAKRLRSDQADATTPPRVTLEATLAGRRFRIVRSPAWERPKKRGAGTTTEPAKVTVSER
VGPDWQPLSSRLDETGDLVVRLLGLDLTQFTQVAMLPQGRFQAFLRARSDERHRLLQQLF
RTGRFEAVERWLRERRIALGHESAAGHQRVADVVSRVSEAAAAPLPDGVDVHDLAPAVDD
DTLRGWVEACLAEAVSAREESQERLAAAGVEEQATRVSLEAARADVARRERLVAARRERD
ALLDRTPAHRADRARLDAARRAAVVVPWHHQAGAAGAAATRATAAADAALGAVADRLGEV
PRTERLPALADRALAAAAEARAQRPHADRLAAVRRALRDNDDRRAQLADDLGRVQHERAV
RPDRLAVLRADVAHARDDTRRVDVLTASAQDARSRLDAHEEVVVLRARVQEVRERWLETR
EQTFVLKDALLAVQRLRLDGMAAELAVALVVGGCCPVCGSGEHPAKARPAPGAPDAATEK
AALNAVADAEVVEHALDQQVRELEQSLAAAEARVGDDPVTDLAERLGSLQDALAAALRSS
GRLPELEARLSTDERALVDLEHRCDEILAADFRLAGERGGLTQEEATLGAQLAAVLGDHA
DLDAVHEAHRRTAELCRAADRAAEEARAAADGRLEADRAVAVAVSDAGFDHLADALAATL
EPGALRALDGAVTRHERRLEAVTEVLRDAGPDDAAPLPDVELLDRRHVEAQARVRAAAAD
VSRYSARTERLAGLLDTLDDELAAWAPVRRDHGVVARLSAFVEGKSADNLLKMRLSAYVL
AYRLSQVVAAANERLARMSDQRYSLEHTGQRGAGESRGGLSLLVRDDWSGESRDPATLSG
GETFVVSLALALGLADVISHEAGGATLDTLFVDEGFGSLDADTLDDVMDTLDSLRDGGRV
VGVVSHVAEMRDRIPTQLHVAKHRRGSTVSLRR
NT seq 2982 nt   +upstreamnt  +downstreamnt
gtgaggctgcaccgactggagatccaggcgttcggcccgttcgccggcgccgcgagcatc
gacttcgacgacctgtccgaggccgggctgttcctgctgtccggggccaccggcgccggc
aagaccagcgtcctcgacgccgtctgcttcgcgctgtacggcgacgtgcccggcgaccgc
agccaggccaagcggctgcgctccgaccaggccgacgccaccacgccgccgcgggtcaca
ctggaggccacgctcgcgggacgccgcttccgcatcgtgcgctcccccgcctgggagcgc
cccaagaagcgcggcgccggcaccaccaccgaacccgccaaggtcacggtctcggagcgg
gtcggccccgactggcagccgctgtcgagccggctcgacgagaccggcgacctcgtcgtc
cggctgctcgggctcgacctcacccagttcacccaggtcgcgatgctgccgcagggccgc
ttccaggccttcctgcgcgcccgctccgacgagcggcaccgcctgctgcagcagctcttc
cgcaccggccgcttcgaggcggtggagcgctggctgcgcgagcgccggatcgccctgggc
cacgagtccgccgcggggcaccagcgggtcgccgacgtcgtcagccgggtcagcgaggcc
gccgccgccccgctgcccgacggcgtcgacgtccacgacctggcgccggccgtcgacgac
gacacgctgcgagggtgggtcgaggcctgcctggccgaggcggtgtccgcgcgtgaggag
tcgcaggagcgcctcgccgcggccggggtcgaggagcaggccacccgggtcagtctcgag
gccgcccgcgccgacgtcgcccgccgcgagcgtctcgtcgccgcgcgccgcgagcgcgac
gcgctcctcgaccgcaccccggcccaccgcgccgaccgggcgcgcctcgatgcggcccgc
cgcgccgccgtcgtggtcccgtggcaccaccaggccggcgccgcgggcgccgccgcgacc
cgcgccacggccgctgccgacgccgccctcggtgccgtggccgaccggctcggtgaggtc
ccccgcaccgagcggctccccgccctcgccgaccgggccctcgccgccgcggccgaggcc
cgggcccagcgaccgcacgccgaccggctcgccgccgtccggcgcgcgctgcgcgacaac
gacgaccggcgcgcccagctcgccgacgatctcggccgggtgcagcacgagcgcgcggtg
cgtcccgaccggctcgcggtgctgcgcgccgacgtcgcccacgcgcgcgacgacacccgc
cgggtcgacgtcctcacggcgtccgcccaggacgcccggtcccgtctcgacgcccacgag
gaggtcgtcgtgctccgcgcccgggtccaggaggtgcgcgagcgctggctcgagacccgc
gagcagaccttcgtgctcaaggacgcgctgctcgccgtccagcggctgcgtctcgacggc
atggccgccgagctcgccgtggccctggtcgtcggcggctgctgcccggtctgcgggtcg
ggcgagcaccccgcgaaggcgcggccggcccccggcgcgcccgacgccgccaccgagaag
gccgccctcaacgccgtggccgacgccgaggtcgtcgagcacgccctcgaccagcaggtg
cgcgagctggagcagtcgctcgccgcggccgaggcgcgcgtgggcgacgacccggtcacc
gacctcgccgagcggctcggctcgctgcaggacgcgctcgccgcggccctgcgctcatcc
ggccggctgcccgagctggaggcgaggctgagcaccgacgagcgcgccctggtcgacctc
gagcaccggtgcgacgagatcctcgccgccgacttccgcctcgccggcgagcgcggcggg
ctgacgcaggaggaggcgacgctcggcgcccagctcgccgccgtcctcggcgaccacgcc
gacctcgacgccgtccacgaggcgcaccggcgcaccgccgagctgtgccgggccgccgac
cgggccgccgaggaggcgcgcgccgccgccgacggccggctcgaggccgaccgggccgtc
gccgtggcggtctccgacgccggcttcgaccacctcgccgacgcgctggccgcgacgctg
gagccgggggcgctgcgcgccctcgacggggccgtgacccggcacgagcgccggctggag
gccgtcaccgaggtgctgcgcgacgccggccccgacgacgccgcgccgctgcccgacgtc
gagctcctggaccgccggcacgtagaggcccaggcgcgggtccgggcggcggcggccgac
gtcagccgctactcggcgcgcaccgaacggctcgcgggcctgctcgacaccctcgacgac
gagctggcggcctgggcgccggtccggcgcgaccacggggtcgtggcccggctctcggcg
ttcgtcgagggcaagtcggccgacaacctgctgaagatgcggctctcggcctacgtgctg
gcctaccggctctcgcaggtcgtcgcggcggccaacgagcggctcgcccggatgagcgac
cagcgctactccctcgaacacaccggccagcggggcgcgggcgagtcccgcggcggactc
agcctgctcgtgcgcgacgactggtcgggcgagtcacgtgaccccgcgaccctgtcgggc
ggggagaccttcgtggtctccctcgccctcgcgctcgggctggccgacgtcatctcgcac
gaggccggcggcgcgacgctcgacacgctcttcgtcgacgagggcttcgggtcgctcgac
gccgacaccctcgacgacgtcatggacaccctcgactcgctgcgcgacgggggccgggtc
gtgggcgtcgtcagccacgtggcggagatgcgcgaccggatccccacccagctgcacgtg
gccaagcaccggcgcggctcgacggtgagcctgcgccggtag

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