Nocardioides sp. S-1144: FE634_14840
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Entry
FE634_14840 CDS
T06354
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE634_14840 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_14840 (mutM)
Enzymes [BR:
noo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FE634_14840 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FE634_14840 (mutM)
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FE634_14840 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_6
DUF2267
DZR
Motif
Other DBs
NCBI-ProteinID:
QCW51368
UniProt:
A0A5B7RAQ1
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All DBs
Position
complement(3100879..3101763)
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AA seq
294 aa
AA seq
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MPELPEVEVVRAGLERHVTGSRITRVDVLHPRPVRRDPRGPEGFAAALAGRRIVAARRRG
KYLWLPLDNGDALLGHLGMSGQLLVQPDDAVPERHLRVRMVLDGAAEDRNLHFVDQRMFG
GLSVSTGGAELPAEIAHIARDPLDPEFDDDLFVARVRRRSSGVKRLLLDQGLVSGVGNIY
ADEALWRARLHGERPGDRLTAAQARTLLGHAREVMEEALGQGGTSFDALYVNVNGESGYF
DRSLHAYGRQDEPCDRCGTPIRRIAFMNRSSYFCPRCQPVPRRRRVPTPVVAPD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgaggtggtccgtgccggcctcgagcggcacgtgaccggc
tcgcggatcacccgggtcgacgtcctccaccctcgtccggtgcgccgtgacccgcggggt
cccgagggattcgccgccgccctcgccgggcgccgcatcgtcgcggcccggcgccgcggc
aagtacctctggctcccgctcgacaacggcgacgccctgctcggccacctcggcatgagc
gggcagctgctcgtccagcccgacgacgccgtccccgagcggcacctgcgggtccggatg
gtcctcgacggggccgcggaggaccgcaacctgcacttcgtcgaccagcggatgttcggc
ggcctctcggtctccaccggcggcgcggagctgccggccgagatcgcccacatcgcccgc
gacccgctcgacccggagttcgacgacgacctgttcgtggcccgggtgcgtcgccggagc
tcgggggtcaagcggctgctgctggaccagggactggtctccggcgtcggcaacatctac
gccgacgaggcgctgtggcgcgctcgcctgcacggcgaacggcccggggaccggctcacc
gccgcccaggcgcgcaccctgctcggccacgcccgcgaggtgatggaggaggcgctcggc
cagggcgggacgtcgttcgacgccctctacgtcaacgtcaacggcgagtccggctacttc
gaccgctcgctgcacgcctacgggcgccaggacgagccgtgcgaccgctgcgggacgccg
atccggcggatcgcgttcatgaaccggtcgtcgtacttctgcccgcgctgccagccggtg
ccgcgccgacgccgggtgcccaccccggtggtcgcgccagattga
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