Nocardioides sp. S-1144: FE634_14960
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Entry
FE634_14960 CDS
T06354
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE634_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
noo03000
]
FE634_14960
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_14960
Enzymes [BR:
noo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FE634_14960
Transcription factors [BR:
noo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FE634_14960
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FE634_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QCW51381
UniProt:
A0A5B7RAR0
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All DBs
Position
complement(3121103..3122617)
Genome browser
AA seq
504 aa
AA seq
DB search
MSAHVRLDPETCYRAVKSRDRRFDGVFYVAVRTTGIYCRPSCPARTPASANVSFHASPAS
AQAGGYRACKRCLPDATPGSPDWDVAADVAGRAMRLISDGVVDREGVEGLAARIGYTPRH
LTRVLTAELGAGPLALARARRAQTARVLIETTDLGYADIAFAAGFSSVRQFNETVRVVYA
ASPTELRGRRGGRRTPGAVTMRLAVRTPFAGRALIDFLAYHLVPGVEVAGDGWYARTLDL
PHGPGTVRLAMGDALEPGQTAFVEARFELADLRDTAAAVERARRLVDADCDPTAVADHFA
GDPVIGPLVRRTPGLRLPGQVDGDETAVRTVIGQQVSVTGARTVTGRVVAEHGRRLDRVE
TTLPGLTHLFPTAAELAGVDPGTLPMPRARGRALVGLAAALAGGDVVLDRGTDRAVVRET
MLGLTGIGPWTADYVAMRALAHPDVFLPTDIGVRNALRGLGHDPVEVIARADDWRPWRSY
ALMHLWNTLMPPTPAAAPADQMEN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccacgtccgtctcgatcccgagacctgctaccgcgccgtgaagtcgcgcgac
cggcgcttcgacggcgtcttctacgtcgccgtccgcaccaccgggatctactgccgcccc
tcgtgcccggcccggacgccggcgtccgcgaacgtgtcgttccacgcgagcccggcctcg
gcgcaggccggtggctaccgcgcctgcaagcgctgcctgcccgacgccaccccgggcagc
cccgactgggacgtcgccgccgacgtcgccggccgcgcgatgcggctgatctccgacggc
gtcgtcgaccgcgagggcgtggaggggctggccgcccggatcggctacacgccgcgccac
ctgacccgggtgctcaccgccgagctcggcgccgggccgctggccctggcgcgggcgcgg
cgcgcgcagaccgcccgggtgctgatcgagaccaccgacctcggctacgccgacatcgcc
ttcgccgccgggttctcgagcgtgcggcagttcaacgagacggtgcgcgtcgtctacgcg
gccagcccgaccgagctgcgcgggcggcgcggcgggcggcgcacgccgggggcggtgacg
atgcgcctcgcggtgcggacgccgttcgcgggccgcgccctgatcgacttcctcgcctac
cacctggtgccgggcgtcgaggtcgccggcgacggctggtacgcccgcaccctcgacctg
ccgcacggcccgggcacggtgcgcctggccatgggcgacgcgctcgagccgggccagacg
gcgttcgtcgaggcccgcttcgagctcgccgacctgcgcgacaccgccgcggccgtcgag
cgcgcccggcggctcgtcgacgccgactgcgacccgaccgccgtcgccgaccacttcgcc
ggtgaccccgtcatcggaccgctggtgcgccgcacgccgggtctgcgcctgccgggccag
gtcgacggcgacgagacggccgtgcgcaccgtgatcggccagcaggtcagcgtcaccggc
gcgcgcaccgtcaccggccgggtcgtggccgagcacggacgccgcctcgaccgggtcgag
acgacgctgcccgggctgacccacctgttcccgaccgcggccgagctcgccggcgtcgac
cccgggaccctgccgatgccgcgggcccgcgggcgcgcgctggtcggcctggccgcggcg
ctggcggggggcgacgtcgtcctcgaccgcgggaccgaccgcgccgtcgtccgggagacg
atgctggggctgaccggcatcgggccctggaccgccgactacgtcgcgatgcgcgccctg
gcccacccggacgtcttcctgcccaccgacatcggcgtccgcaacgcgctgcgcggcctg
ggccacgatcccgtcgaggtgatcgcccgcgccgacgactggcggccctggcgctcctac
gcgctgatgcacctctggaacacgctcatgcccccgacgccggccgccgcgccggccgac
cagatggagaactga
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