Nocardioides sp. S-1144: FE634_15235
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Entry
FE634_15235 CDS
T06354
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
noo
Nocardioides sp. S-1144
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_15235
Enzymes [BR:
noo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FE634_15235
DNA repair and recombination proteins [BR:
noo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FE634_15235
Prokaryotic type
FE634_15235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QCW51417
UniProt:
A0A5B7RG89
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All DBs
Position
complement(3179965..3181200)
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AA seq
411 aa
AA seq
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MPVLPAPPSLDDGAAPEDVASWVAAHLGDLAREGADGVRPGALRGGQAAADAALAGLDVR
GYARSRSTVLPVARQGATRMSPYVRHGLVGLAELWAAVAQAADHDRRRYRDELLWQEYAR
HLYARVGADLGRSLRHEQPRPSGWPAAPWSEELRCVEHATDALRSDGWVVNQQRMWLASQ
WAVRAGAAWRVGEDTMFAHLLDGSRAANRLGWQWTVGTGSGKPYGFSRWQVEKRAPELCR
RCSLRDACPIDDWPDAGVGPAVPGPELGRAPVPGGPDAVVGGGGERVWLTAESLGLGDPA
LVADPDRHATFVFDEPLLRRLQLSGKRLVFLAETLGEIAATRPLEVRRGDVVAELAGVPL
ATTYAPVPGWHRRRAALDVVEVHPWPWLVAPRADRPASVRSFSAWRKDVGR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtgctgcccgccccaccgtcgctcgacgacggagccgcccccgaggacgtcgcg
tcgtgggtggcggcccacctcggcgatctcgcccgcgaaggtgcggacggcgtccggccc
ggtgcgctgagaggcgggcaggccgcggccgacgccgccctggcgggtctcgacgtgcgt
ggctacgcccgctcacgcagcacggtgctgccggtggcacggcagggggcgacccggatg
tcgccgtacgtgcgccacggcctggtcgggctcgccgagttgtgggcggcggtcgcccag
gcggcggaccacgaccgccggcgctaccgggacgagctgttgtggcaggagtacgcacgt
cacctctacgcacgcgtgggcgccgacctggggcggtcgctgcgtcacgaacagccccgg
ccgtccgggtggcccgcggcgccgtggtcggaggagctgcggtgcgtcgagcacgcgacc
gacgcgcttcgcagcgacggctgggtggtcaaccagcagcggatgtggttggcctcgcag
tgggcggtgcgggccggagccgcgtggcgtgtgggtgaggacacgatgttcgcccacctc
ctcgacggctcgcgagccgccaaccggctcggctggcagtggaccgtcggcaccgggagc
gggaagccctacggcttcagccggtggcaggtcgagaagcgagcgccggagctgtgccgc
cgttgcagcctgcgcgacgcctgcccgatcgacgactggccggacgccggcgtgggaccg
gccgtcccaggtcctgagctgggcagggcgccggtgcccggcggtcccgatgcggtggtc
gggggcggcggcgagcgggtctggttgaccgcagagtccctcgggctgggtgaccccgcc
ctcgtcgcagacccggaccggcacgccaccttcgtcttcgacgagccgctcctgcggcgg
ctccagctctcgggcaagcgactggtcttcctggccgagaccctcggcgagatcgccgcg
acccgccccctggaggtgcgtcggggcgacgtcgtggccgagctcgccggcgtcccgctc
gcgacgacgtacgccccggtgcccgggtggcaccggcggcgcgcagccctcgacgtggtc
gaggtgcacccctggccgtggttggtggcgccgcgcgccgaccggcccgcgagcgtgcgg
tccttcagcgcgtggcgcaaggacgtcggccgctga
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