Nocardioides sp. S-1144: FE634_17430
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Entry
FE634_17430 CDS
T06354
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FE634_17430
09124 Replication and repair
03420 Nucleotide excision repair
FE634_17430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noo03021
]
FE634_17430
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_17430
Enzymes [BR:
noo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE634_17430
Transcription machinery [BR:
noo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FE634_17430
DNA repair and recombination proteins [BR:
noo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FE634_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QCW51746
UniProt:
A0A5B7RGW8
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All DBs
Position
3614983..3616623
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AA seq
546 aa
AA seq
DB search
MNTGPLIVQSDKTLLLEIDHEQAADCRKAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEQVVDILLTYSRYAVPHSLLVDVAETMARYGRLRLEKHPVHGLVLASNDRPVLEEVL
RAKKIAGMLGNRIDDDTVAVHASERGNLKQALLKLGWPAEDFAGYVDGEAHAIALDETEW
HLRDYQRQAADSFWHGGSGVVVLPCGAGKTLVGAAAMAHAQATTLILVTNTVSARQWKDE
LIKRTSLTEDEIGEYSGTVKEIRPVTIATYQVMTTKRGGAYRHLELLDARDWGLIVYDEV
HLLPAPIFRMTANLQARRRIGLTATLVREDGREGDVFSLIGPKRFDAPWKDIEAQGWIAP
ADCVEVRVTLPTSERLVYAVAEPEERYRLASCTHEKIQVVRDLVAAHGDQPTLVIGQYID
QLDELAEKLDAPVIKGETPVKERQRLFEAFRSGEIGLLVVSKVANFSIDLPSAEVAIQVS
GSFGSRQEEAQRLGRLLRPKDDGKTAHFYTIVSRDTVDADFAQNRQRFLAEQGYAYRIVD
AEDLPA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccggcccgctcatcgtccagtcggacaagaccctcctgctcgagatcgaccac
gagcaggcggccgactgccgcaaggcgatcgcgccgttcgccgagctcgagcgctccccc
gagcacgtccacacctaccggctgacgccgctggggctgtggaacgcccgcgcggccggg
cacgacgccgagcaggtcgtcgacatcctgctcacctacagccgctacgccgtcccgcac
tcgctgctcgtcgacgtcgccgagacgatggcgcgctacggccggctgcgcctggagaag
cacccggtgcacggcctggtgctcgccagcaacgaccggccggtgctcgaggaggtgctg
cgcgccaagaagatcgccgggatgctcggcaaccggatcgacgacgacaccgtcgccgtc
cacgcctccgagcgcggcaacctcaagcaggcgctgctcaagctggggtggccggcggag
gacttcgccggctacgtcgacggcgaggcccacgcgatcgcgctcgacgagaccgagtgg
cacctgcgcgactaccagcgccaggcggccgactcgttctggcacgggggctcgggcgtc
gtcgtcctgccctgtggcgccggcaagaccctggtcggcgccgcggccatggcccacgcc
caggcgaccacgctgatcctggtcaccaacaccgtgagcgcgcggcagtggaaggacgag
ctgatcaagcgcacctcgttgaccgaggacgagatcggcgagtactccggcaccgtcaag
gagatccggccggtcaccatcgcgacctaccaggtgatgacgaccaagcgcggcggcgcc
taccgccacctcgagctgctcgacgcccgcgactggggcctcatcgtctacgacgaggtg
cacctgctgcccgcgccgatcttccggatgacggccaacctccaggcgcggcgccggatc
gggctgaccgcgaccctggtgcgcgaggacggccgcgagggcgacgtgttctcgctgatc
gggccgaagcggttcgacgccccgtggaaggacatcgaggcgcagggctggatcgccccg
gccgactgcgtcgaggtccgggtgaccctgccgacgtcggagcggctggtctacgccgtc
gccgagcccgaggagcgctaccgcctcgcctcctgcacccacgagaagatccaggtggtc
cgcgacctcgtcgccgcccacggtgaccagccgacgctggtcatcgggcagtacatcgac
cagctcgacgagctcgccgagaagctcgacgccccggtcatcaagggcgagaccccggtc
aaggagcgccagcgcctcttcgaggcgttccgctccggcgagatcggcctgctcgtggtg
tcgaaggtcgcgaacttctccatcgacctgccctcggccgaggtcgcgatccaggtgtcc
ggctcgttcggctcgcgccaggaggaggcccagcgtctgggccggctgctgcgtcccaag
gacgacggcaagaccgcgcacttctacacgatcgtctcccgcgacaccgtcgacgccgac
ttcgcccagaaccggcagcgcttcctcgccgagcagggctacgcctaccggatcgtcgac
gccgaggacctgccggcctga
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