Nocardioides sp. S-1144: FE634_21115
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Entry
FE634_21115 CDS
T06354
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE634_21115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_21115
Enzymes [BR:
noo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FE634_21115
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FE634_21115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QCW52306
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Position
4395893..4396687
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AA seq
264 aa
AA seq
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MTIAIGAHVDQTDPLAEARARKAPLVQFFLGDPQSYGGPEWAYAGGPEALRADAEAAGVD
LYVHAPYLVNVATTNNRIRIPSRKLLQQHVDAAASIGAKGLIVHGGHVNKADDPEKGFDN
WRKAIEATDLKLPLLIENTAGGDNAMTRYLERIGRVWEAISGAEGFDMVGFCLDTCHAHA
GGNDLETVVDDVRAITGRIDLVHCNDSRDEFDSGADRHANFGAGRIDPDLLAAVVRDAGA
PVVCETPGGAAEHTADFAWLSARL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcgatcggtgcccacgtcgaccagaccgaccccctcgcggaggcgcgggcc
cgcaaggcgccgctcgtgcagttcttcctcggcgacccgcagtcctacggcggccccgag
tgggcctacgccggcgggccggaggcgctcagggccgacgccgaggcggccggcgtcgac
ctctacgtgcacgcgccctacctggtcaacgtcgccacgaccaacaaccggatccggatc
ccgagccgcaagctgctccagcagcacgtcgacgcggccgcctcgatcggcgcgaagggc
ctgatcgtgcacggtggccacgtcaacaaggccgacgaccccgagaaggggttcgacaac
tggcgcaaggccatcgaggccaccgacctcaagctgccgctgctcatcgagaacaccgcc
ggcggggacaacgccatgacccgctacctcgagcggatcggccgggtctgggaggcgatc
tcgggcgccgagggcttcgacatggtcgggttctgcctcgacacctgccacgcccacgcc
ggcggcaacgacctggagaccgtcgtcgacgacgtccgcgcgatcaccggccggatcgac
ctcgtgcactgcaacgacagccgcgacgagttcgactccggtgccgaccggcacgccaac
ttcggtgccgggcggatcgaccccgacctgctcgccgccgtcgtccgcgacgccggcgcg
ccggtcgtctgcgagacgcccggcggggcggccgagcacacggccgacttcgcgtggttg
tccgcgcggctctga
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