Nocardioides sp. S-1144: FE634_21155
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Entry
FE634_21155 CDS
T06354
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
noo
Nocardioides sp. S-1144
Pathway
noo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FE634_21155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noo03019
]
FE634_21155
Enzymes [BR:
noo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FE634_21155
Messenger RNA biogenesis [BR:
noo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FE634_21155
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QCW52311
UniProt:
A0A5B7RDS9
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All DBs
Position
complement(4407396..4408859)
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AA seq
487 aa
AA seq
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MPAPSNPEPLSIVEVQRRVDRELDRLAPLLDGLGALFADAGHELHLVGGPVRDAMLGRSH
TDLDFTTSAPPEVTERLLKRWGDALWDMGRDFGTIGARRGDWMVEVTTYRSETYDPASRN
PVVAYGDTLAGDLGRRDFTVNAMAVSVPGRGFEDPYGGIVDLAHQVLRTPGRPEDSFGDD
PLRMLRAARFAAQLGFTVAPEVVAAMTAMAERITIISAERVRDELVKLICAPYPRLGLTL
LVDTGLAALVLPELPALQLERDEHHRHKDVYEHTLTVLEQAIDLEPRLSADGGPDFVSRF
AALMHDVGKPRTRRLLDDGTVTFHHHDVVGAKLTTKRMKALRFSNDEIAAVSQLVELHLR
FHGYGSGEWTDSAVRRYVRDAGDQLARLHVLTRADCTTRNQRKADRLRRTYDDLEARIER
LSEEEELASLRPDLDGNQIMEILGVGPGREVGEAYRFLLELRLDRGPLDEDAAREALLAW
WAERPST
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccccgtcgaacccggaaccgctctcgatcgtcgaggtgcagcgacgggtcgac
cgcgagctcgaccgcctcgccccgctcctcgacggcctgggtgccctcttcgccgacgcc
ggccacgagctgcacctggtcggcggaccggtccgcgacgcgatgctcggccgctcgcac
accgacctcgacttcacgacctccgcgccgccggaggtgaccgagcggctcctcaagcgc
tggggcgacgcgctgtgggacatgggtcgcgacttcggcacgatcggcgcgcgcaggggc
gactggatggtcgaggtgacgacgtaccggtccgagacctacgacccggcgtcgcgcaac
cccgtcgtcgcctacggcgacacgctggccggcgacctcggccggcgcgacttcaccgtc
aacgcgatggcggtcagcgtgcccggccgcggcttcgaggacccctacggcgggatcgtc
gacctggcccaccaggtgctgcgcacgccgggccggcccgaggactccttcggcgacgac
ccgctgcggatgctgcgcgcggcgcgcttcgccgcccagctcggcttcaccgtggcgccc
gaggtcgtcgcggcgatgaccgccatggccgagcggatcacgatcatctccgccgagcgg
gtccgcgacgagctggtcaagctgatctgcgcgccgtacccgcgcctcggcctgaccctg
ctggtcgacaccggcctggccgcgctggtgctcccggagctgcccgccctccagctcgag
cgcgacgagcaccaccggcacaaggacgtctacgagcacaccctgaccgtgctggagcag
gccatcgacctggagccgcggctctcggccgacggcggcccggacttcgtctcccgcttc
gccgccctcatgcacgacgtcggcaagccgcgcacccgccggctcctcgacgacggcacc
gtcaccttccaccaccacgacgtcgtcggggccaagctgacgacgaagcggatgaaggcg
ctgcggttctccaacgacgagatcgccgcggtgagccagctcgtcgagctccacctgcgc
ttccacggctacggctcgggggagtggaccgactccgcggtgcgccgctacgtccgcgac
gccggcgaccagctcgcccgcctgcacgtgctcacccgcgccgactgcaccacccgcaac
cagcgcaaggccgaccggcttcgccggacctacgacgacctcgaggcgcgcatcgagcgg
ctctcggaggaggaggagctggcctccctgcgtcccgacctcgacggcaaccagatcatg
gagatcctcggtgtcggtcccgggcgcgaggtcggcgaggcctaccggttcctgctcgag
ctgcgcctcgatcgcggaccgctcgacgaggacgccgcccgcgaggcgctcctcgcgtgg
tgggccgagcgtccgagcacctga
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