Nostoc sp. PCC 7524: Nos7524_0555
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Entry
Nos7524_0555 CDS
T02363
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nop
Nostoc sp. PCC 7524
Pathway
nop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nos7524_0555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nop03019
]
Nos7524_0555
03400 DNA repair and recombination proteins [BR:
nop03400
]
Nos7524_0555
Enzymes [BR:
nop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nos7524_0555
Messenger RNA biogenesis [BR:
nop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nos7524_0555
DNA repair and recombination proteins [BR:
nop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nos7524_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_24
GerE
HTH_38
HTH_29
HTH_7
Sigma70_r4_2
HTH_IclR
HTH_11
HTH_23
HTH_5
MarR
HTH_28
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AFY46466
UniProt:
K9QMT1
LinkDB
All DBs
Position
638699..640855
Genome browser
AA seq
718 aa
AA seq
DB search
MLQYPNLEQALKYHFGYDQFRPGQRQIIEDALQNRDLLVVMPTGGGKSLCFQLPALMKSG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNPYQVRSREDAILNGKVRLLYVAPERL
LSERFLPFLDLVHEKIGISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVPMLALTA
TATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRAKSKQAYAELLELIRDTEGSVIIY
CLTRKKVEELTFKLQNDKIAVLPYHAGLPDAERSQNQTRFIRDDVRVMVATIAFGMGINK
PDVRLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFADIKTIEWSIEQKTEPQEQL
IARQQLRQMIDYAEGTDCRRTIQLGYFGERFAGNCGNCDNCRYPKPLEDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGAKKEKITQYEHDKLSTYGIGKDRSVDEWRMLGRSLLHQGLL
EQTSDGYSVLKLNALSWEVMRRQRQVLLSVPVAQKVRLVEDHPKAEIAEALLHRLRSLRK
QLADEQSVPPYVVFHDSTLKLMAQVQPKNLAEFGKLSGVGSHKLAQYGEKFLSEIRAYRQ
EQSSTDKPVNSTPSLSLVSGSELQTLQLHQQGLNIAQIAQKRNLSPSTIASHLEKLIEKN
QPVDLNQLVPLEHQQKIWQVLEVLGDIALTPIKEQLGDSYTFNEIRLVREKWRRQNRK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtatcccaatctcgaacaggcgctaaaatatcacttcggttatgatcagttc
cggccgggacaacggcaaattatcgaagatgcgctgcaaaatcgggatttattggtggtg
atgcctacaggtggcggtaagtctttgtgctttcagttacctgcactgatgaagtcagga
ctaactgtggtggtatcaccgttaattgctttgatgcaagaccaagtagaagcactacga
aataataatatctcggctacgtttctcaatagtagtttgaatccttatcaggtgcgatcg
cgtgaagatgccatcctcaacggtaaggtaagattactctacgtcgctccagaacgttta
ctcagtgaaaggtttctgccattcctcgatttagtacacgaaaaaatcggcatatctatt
tttgctatcgatgaagcccattgtgtttctgagtggggacacgattttcgtccagaatat
cgtcagttgaaatctttgcggaaacgttatcctaatgtcccgatgcttgcccttaccgcc
accgctacagatcgcgtccgggctgatattattcaacaattaggattaaagcagcctagt
attcacatcgctagctttaatcggcaaaatctttattacgaagtccgtgctaaaagtaaa
caggcttacgcggaattattagaattaattcgtgatactgaaggttcagtgattatttat
tgtttaactcgcaaaaaagtcgaagaactgacttttaaactgcaaaatgataagattgct
gtcttaccttatcatgccggattacctgatgccgaacgtagccaaaatcaaacgcgattt
attcgggatgatgtgcgggtaatggtggcgactatcgcctttggcatgggaattaataaa
cccgatgtgcggttagtggttcactttgatattccccggaatttagaaagttactatcaa
gaatcaggcagggctggtagggatggcgaaccttcaaggtgtacaatctttttcagtttt
gctgatattaaaactattgaatggagtatagaacaaaaaaccgaacctcaagagcaattg
attgctcggcaacaactccggcagatgatagattatgctgaggggacagattgccgccgc
acaattcaactgggttattttggtgaacgttttgctggtaattgtggtaactgtgataat
tgccgctatcccaaacctttagaagattggacaattgaagccatgaagtttttatcttgt
gtggcgcgatgtaaagaaagatttgggatgttacacattattgatgtgttacgcggagca
aaaaaagagaagattactcaatacgaacatgataaactttctacctacggcataggtaaa
gatagaagtgtagatgagtggcgaatgttggggcgatcgcttttacatcaaggtttacta
gaacaaactagcgatggctattctgttctcaaattaaatgctttgagttgggaagttatg
cgccgccaacgccaagtcttattatctgttcctgtggcgcagaaggtgcggttagtagaa
gatcaccccaaagcagaaatagcagaagcattgttgcatagactgcgatcgctacgtaaa
caattagctgatgaacagtctgtaccgccttacgtagtctttcatgattctactttaaaa
ctgatggctcaagtccagccgaaaaacctggctgagttcggtaaactttctggtgtaggt
agccacaaactcgcccaatacggggaaaagtttctgtcagaaattcgcgcctaccgtcaa
gaacaaagttcaacagataaacctgtgaattctacaccctcactcagcttagtttctggc
tctgaattacagacattacagttacatcaacaaggtttaaatattgctcaaatagcccaa
aaacgcaacctgagtccatctaccattgctagtcacttagaaaaactcattgaaaaaaat
cagcctgtagatttaaatcaattagtacctctagaacaccagcaaaaaatttggcaagtt
ttggaagtgctgggtgatattgctttgacaccaattaaagaacagttaggcgacagttat
acctttaatgagattcgcctagttcgggaaaagtggcggcgacaaaatcgtaagtag
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