Nostoc sp. PCC 7524: Nos7524_1341
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Entry
Nos7524_1341 CDS
T02363
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nop
Nostoc sp. PCC 7524
Brite
KEGG Orthology (KO) [BR:
nop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nop03016
]
Nos7524_1341
Enzymes [BR:
nop01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Nos7524_1341
Transfer RNA biogenesis [BR:
nop03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Nos7524_1341
Prokaryotic type
tRNA splicing ligases
Nos7524_1341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AFY47222
LinkDB
All DBs
Position
complement(1574172..1575353)
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AA seq
393 aa
AA seq
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MPYEKLEIKTQSPVLSWANHPLGSEEIKMAKNVASLPFVFKHVALMPDVHLGKGALVGSV
IATKEAIIPAAVGVDIGCGMSAIKTPFTAEQLEGKLKKIRLDIEAAIPTGFNENKDAEKS
VTNWQRWRDFQDLHRGVQDLQSKAMKQMGSLGGGNHFIEVCLDTENQVWLMLHSGSRNIG
NNLAQCHINTAKELAKMAGNNLSDPDLAYFIAGTPEFQAYWHDLQWAQNYASFNRDVMMA
RFKRIIEKHLAGGKVTKPLLQVNCHHNYAEKEIHFGEDVYVTRKGAVRADKEDYGIIPGS
MGAKSFIVKGKGNVHSFCSCSHGAGRLMSRNKAKNVYTLDDLIEQTQGVECRKDTGVLDE
IPGAYKPIDQVMENQSDLVEVVATLKQVVCVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgaaaagttagaaattaagacacaatcacccgttttatcttgggcaaatcac
cccttgggttcagaagaaatcaagatggctaaaaatgtggcatcgctaccttttgtattt
aaacacgtagcattaatgccagatgttcacttaggaaaaggtgctttagttggttctgta
attgcgacaaaagaagcaattattcctgctgctgtcggcgtggatattggttgcggtatg
agtgctattaaaacaccatttactgctgaacaattagaaggcaaactcaagaaaattcgt
ctcgatattgaagcagcaattcctacaggttttaacgaaaataaagatgcagaaaaatct
gtcaccaattggcaacgttggcgagattttcaagacttgcatcgtggggtgcaagactta
caaagtaaagcgatgaaacaaatgggttctctcggcggcggaaatcattttattgaagtg
tgcctagatacagagaaccaagtttggctgatgttacattccggttctcggaacattggc
aataatctcgctcaatgccatattaatacagctaaggaattagcaaagatggcgggtaat
aatttatctgacccggatttggcttattttatagctggtacaccagaatttcaggcttat
tggcatgatttacaatgggcgcaaaattacgccagtttcaatcgcgatgtaatgatggca
cgttttaaacgcatcatagaaaaacatctagccggaggcaaggtaactaaacctttatta
caggtaaattgtcatcataactacgctgaaaaagaaatacattttggcgaagatgtgtat
gtcactcgtaaaggtgcagtccgcgccgataaagaagactatgggattattcctggttca
atgggagcaaaatctttcattgtcaaaggtaaaggtaatgttcatagcttttgttcttgc
tctcacggtgctggtcgtttaatgtcaagaaataaagctaaaaatgtctacacccttgat
gatttaattgagcaaactcagggtgtagaatgccgcaaagatacgggtgttttagatgaa
attcccggtgcttataagccgatagatcaagtgatggagaatcaatctgatttggtggaa
gttgtagccacactcaaacaagttgtttgtgtaaaaggttga
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