Nostoc sp. PCC 7524: Nos7524_1583
Help
Entry
Nos7524_1583 CDS
T02363
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nop
Nostoc sp. PCC 7524
Pathway
nop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nos7524_1583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nop03019
]
Nos7524_1583
03400 DNA repair and recombination proteins [BR:
nop03400
]
Nos7524_1583
Enzymes [BR:
nop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nos7524_1583
Messenger RNA biogenesis [BR:
nop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nos7524_1583
DNA repair and recombination proteins [BR:
nop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nos7524_1583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFY47458
UniProt:
K9QPY5
LinkDB
All DBs
Position
complement(1935158..1936600)
Genome browser
AA seq
480 aa
AA seq
DB search
MNNQKTKSWEEVRATFQKIWGYDDFRSPQGEIVNSLLNQKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELIERQQKAALLHSELPSSQRRATLQALEKQQLRLLYL
SPETLLSPPVWERLCQPQVQINGLILDEAHCLVQWGETFRPAYRRLGAVRPALLKHKPPG
TKISIAAFTATADPLAQKTIQTVLQLQQPEIFRLNPYRPNLHPTVRIAWTPRGRKQQLIK
FIQNRPKQAGLIYVRTRRDSENLAAWLAEMGYKTASYHAGLGATERREVEASWLGDKIPF
VVCTCAFGMGINKPNVRWVVHYHAPHLLSEYVQEIGRGGRDGKPAEALTLISEPTGWLDP
DDKQRQQFFQEQMRSQQQKAQQLIKKLPAQGEVNAITKQFPDSAIALALLHSSGQLNWLD
PFHYKIEHKAKNQPPTQLHAAQQMTQYLNTKQCRWQFLLNAFGFAKEATNWRCGHCDNCR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaaaaaacaaaatcttgggaagaagtccgcgctacttttcaaaaaatttgg
ggttatgatgatttccgttcgccacagggagaaatcgtcaacagtttattaaaccaaaaa
gatgcactcataattatgcccactggaggcggaaaatcaatttgttttcaactacctgca
ttattacaaactggcttaactttggtagtatccccattagtggcactgatggaaaatcaa
gtacaggaattaattgaacgtcaacaaaaagctgcattattgcatagtgaattaccatca
tcccaacgccgtgcaacactgcaagcattagaaaaacaacaactaagattactgtattta
tcaccagaaactttattaagtccgccagtctgggaaagattatgtcagccacaagtgcaa
attaacggcttaattctcgatgaagcccattgtttagtacagtggggtgaaacctttcgc
ccagcttaccgcagattaggggctgtcagacctgcattactcaaacataagccaccagga
acaaaaatcagcattgctgcatttaccgccacggctgaccccttagcgcaaaaaactatt
caaaccgttttacaattacaacaaccggaaatatttcgcctcaatccttaccgtccaaat
ttgcatcctactgttcgcatcgcttggacaccaaggggaagaaaacaacaattaatcaaa
tttattcaaaatcgaccaaaacaagccggattaatttatgttcgcactcggcgagatagt
gaaaatttagctgcttggttagcagagatgggttacaaaaccgctagttatcacgcgggt
ttaggtgcaacagaacgccgggaagtggaagcgagttggttgggtgataaaattccgttt
gtggtgtgtacctgcgcctttggcatggggataaataagcctaatgtgcgctgggttgtc
cactatcacgcaccgcatctgttatctgaatatgtgcaggaaattgggcgtggtggtaga
gatggtaaaccggctgaggctttgacattgataagtgagcctacagggtggctagatcca
gatgataaacaaagacaacagttttttcaagaacaaatgcgatcgcagcagcaaaaagcc
cagcagttaatcaaaaaactcccagcacaaggtgaagttaacgcgataactaaacaattt
cccgatagtgcgatcgcattagctttactgcatagtagtggacaattaaactggcttgac
cctttccattacaaaatagaacacaaagccaaaaaccagccacccacacaattacacgct
gctcaacaaatgactcaatatttaaatactaaacaatgccgttggcaatttttattgaat
gcttttggttttgccaaagaagccactaactggcgttgtggacattgcgataattgtcgt
taa
DBGET
integrated database retrieval system
