Nostoc sp. PCC 7524: Nos7524_2499
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Entry
Nos7524_2499 CDS
T02363
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nop
Nostoc sp. PCC 7524
Pathway
nop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nos7524_2499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nop03019
]
Nos7524_2499
03009 Ribosome biogenesis [BR:
nop03009
]
Nos7524_2499
Enzymes [BR:
nop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Nos7524_2499
Messenger RNA biogenesis [BR:
nop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nos7524_2499
Ribosome biogenesis [BR:
nop03009
]
Prokaryotic type
rRNA helicases
Nos7524_2499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFY48339
UniProt:
K9QTE7
LinkDB
All DBs
Position
3055684..3057216
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AA seq
510 aa
AA seq
DB search
MNLSFPELGISQERVDHLEKIGFTTPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLP
ILERIDVQQRGVQALVLTPTRELAIQVHDAMCQFIGHSGVRVSAIYGGQSIDRQILQLKR
GVHIVVGTPGRVIDLLERGSLKLDQVRWFVLDEADEMLSMGFIDDVERILSQAPQERQTA
LFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFERRKQQIFERH
VRQNWQLLSIPTRAQIEARHIQKLQGQVKEALTGERLASFLPIISELIEQYDAQAIAAAA
LQIAYDQTRPAWLSSEVEIPEEAPTPKPKLGKRRDFGDDRHRSHWNRSDNNGDDDRRSTP
KPKLRSGRREPSVSSGNHKLGSSTARESAS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttcttttccagaactaggcatttcacaggaacgcgttgaccacttagaaaaa
attggttttacaacacctaccaacattcaggctcaagctattccccaactgttgtcaggc
cgggatgtagtaggtcaatctcaaactggtacaggcaaaacagccgctttttccctgcca
attttagagcggattgatgtgcagcaaagaggtgtgcaagccttagttttaactcctacc
cgtgaactagccattcaagtacacgatgcaatgtgccaatttattggtcacagtggcgtg
cgggtgtcagcaatttacggtggtcaatcaattgaccgtcaaattttacaactcaagcgt
ggtgtacatatagtagttggtactcccggacgggtgattgacttactagaacggggcagc
ctgaaactagatcaagtcagatggtttgtcctagatgaagccgatgaaatgttaagcatg
ggctttattgatgatgtcgagagaattctttctcaagcaccccaagagcgacaaactgcg
ctattttcagctaccatgccaccatcgattcggatgttggtcaacaagtttttgcgatcg
cctgtgacagtcacagttgagcaaccaaaagccacccccaacaaaatcaatcaggtagcg
tatctcattccccgccactggacaaaagccaaagctttacagccaattctggaaatggaa
gacccagaaaccgctttaatctttgtccgtaccagacgtacagccgccgaacttaccagt
caactacaagctgctggtcatagtgttgatgaatatcatggtgacttgtcacaacaagca
cgggaaaggttactaactagattccgtaatcgccaagtacgttgggtagtagctaccgac
attgcagcgcgcggtttagatgtcgatcaactatcccatgtgatcaacttcgacctcccc
gatagcgttgaaacctacgttcaccgcattggccgtacaggtcgcgccggaaaagaaggt
acagccatcaccttagtacagccttttgagcgtcgcaaacagcaaatctttgaacgccat
gtgcgccaaaactggcaattgctgtctattcccacacgagcgcaaattgaagcccgtcac
attcaaaaattgcaaggacaagtcaaagaagccttgactggagagcgtttagcttcattc
ttgccaattatcagcgaactgattgagcaatatgacgctcaggcgatcgcagctgcggca
ctacaaatcgcttacgatcaaactcgtcccgcatggttaagttcagaggtcgaaattcct
gaagaagcacctactcccaaacccaaactaggcaagcgtcgcgacttcggtgatgacaga
caccgttctcattggaatagatccgataacaatggagatgacgacagacgctcaactcct
aagccaaaactacgctcaggtcgccgtgagccttctgtttcttctggtaatcacaagtta
ggctcatccacagctagggaatcagcttcatag
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