Nocardioides okcheonensis: LN652_00060
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Entry
LN652_00060 CDS
T07822
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
noq
Nocardioides okcheonensis
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noq03021
]
LN652_00060
Transcription machinery [BR:
noq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN652_00060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF1780
Xre-like-HTH
MarR_2
HTH_37
HTH_3
KORA
Motif
Other DBs
NCBI-ProteinID:
UFN44657
LinkDB
All DBs
Position
complement(12445..13293)
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AA seq
282 aa
AA seq
DB search
MATVSVLTPCPAHLRDIEPARTTGATDAPGGSRSERTASIVEQLRSAATDDERRLLVHEL
IETNAQVARSMAARYRDRGIDVEDLEQVALVGLTKAAQRFEPDAGHDFLSYAVPTVRGEL
RRHFRDLGWVIRVPRRIQELQARVRAVEPTLHARLERTPQAADYAAHLGVDLADVVEALS
ADTCYRPTSIDHSPTQGSASLGDLLGHDDPELAGAEARMLLGTAVGRLTDRERLILGWRF
VDDRTQQEIGDMIGLDQAQVSRILRKVLARLRADLSELVPAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtgtcggtcctcaccccgtgccccgcgcacctccgtgacatcgagcccgcc
cgcaccaccggcgccaccgacgcccccgggggatcccggtccgagcgcaccgcgtcgatc
gtcgagcagctccgctccgcggccaccgacgacgagcgccgcctgctggtccacgagctg
atcgagaccaacgcccaggtggcgcgctcgatggccgcccgctaccgcgaccgcggcatc
gacgtcgaggacctcgagcaggttgccctggtcgggctcaccaaggccgcgcagcgcttc
gagcccgacgccggccacgacttcctgtcctacgcggtcccgaccgtccgcggcgagctg
cgccgccacttccgcgacctgggctgggtgatccgggtcccgcggcgcatccaggagctg
caggcccgggtccgcgcggtcgagccgaccctccacgcccgcctcgagcggacgccacag
gccgccgactacgccgcgcacctcggcgtcgacctcgccgacgtggtcgaggcgctctcg
gccgacacctgctaccgaccgacgtcgatcgaccactccccgacccagggctcggccagc
ctgggcgacctgctcggccacgacgacccggagctcgcgggcgccgaggcccggatgctg
ctcggcacggcggtcggccggctcaccgaccgcgagcggctgatcctcggctggcgcttc
gtcgacgaccgcacccagcaggagatcggcgacatgatcgggctcgaccaggctcaggtg
tcgcgcatcctgcgcaaggtgctcgcccgcctgcgcgcggatctctccgagctggtcccc
gccgcctag
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