Nocardioides okcheonensis: LN652_00245
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Entry
LN652_00245 CDS
T07822
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
noq
Nocardioides okcheonensis
Pathway
noq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LN652_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_00245
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LN652_00245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LN652_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
nSTAND1
AAA_33
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UFN44693
LinkDB
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Position
56292..58700
Genome browser
AA seq
802 aa
AA seq
DB search
MAHHETDRYVRVRGASEHNLREVDVDVPRDSIVVFTGVSGSGKSSLAFDTIYAEAQRRYF
ESVAPYARRLLQQVDTPHVHEITGLPPAVALRQQRGGVSSRSTVGTLTTLSNLLRMLLSR
AGTYPDGAERLSAEAFSPNTVVGACPVCHGLGVVHDVAEDLLVPDTSLTIREGAIAAWPG
AWQGHNLRRVTHRLGIDVDTPWQDLAEADRQWLLFTDERPAVLIRPADKDGGGGRDYMGT
FRSARAHVHHVLATSSSEKARRDMERFMRSTPCEACGGAGLRPEALAVTFDGRTIRELSC
STIVELEQVLRSRAHGDDVAARLCADMAGRLEVLVRLGLGYLSLDRPSTTLSSGEAQRLR
IATQLRAGLFGVAYVLDEPSAGLHPAEAEPLLDVLEQLKAGGNSVLVVEHNLDVIRRADW
IVEIGPGAGAAGGRVVHSGPLAGLEGVEGSATAPFLFGGARPDGHATRTPSRWFEADDVA
VHNLQHLDVRVPLDALTVVTGLSGAGKSTLLHGVLGRSVRDLLDGHAGEAAEIGEVRGAE
QVDRLVVVDQRPIGRTPRSNVATYVGLFDTVRKLFAETPEARRRGYGAGRFSPNVAGGRC
EVCRGEGVQNVELLFLPGVTTPCSACQGRRFNDETLEITYRGHTVADVLALSVDRALEVF
DEVPAVARRLRALCDVRLGYVRLGQTAMEVSGGEAQRIKLASELQRADRGHGLYLLDEPT
TGLHASDVAVLAGLLHRLVDSGNTVVVVEHDLSVVAGADWVIDLGPAGGDQGGRVVATGT
PQDVARSGTGATAEHLRRHLDA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccacgagaccgaccggtacgtccgtgtccgcggcgcgtccgagcacaacctg
cgcgaggtcgacgtcgacgtcccgcgcgactcgatcgtcgtcttcacgggggtctcgggg
tcgggcaagtcgtccctggcgttcgacacgatctacgccgaggcgcagcgccgctacttc
gagtccgtcgcgccctacgcgcgccggctgctccagcaggtcgacacgccccacgtgcac
gagatcaccggactgcccccggccgtcgcgctgcgccagcagcggggcggggtgagctcg
cgctccaccgtcgggaccctcaccaccctgtccaacctgttgcggatgctgctctcgcgg
gccggcacctaccccgacggcgcggagcggctctcggccgaggcgttctcgcccaacacc
gtcgtgggcgcgtgccccgtgtgccacggcctcggcgtggtgcacgacgtggccgaggac
ctgctggtgcccgacacctcgctcaccatccgggagggagcgatcgcggcctggccgggc
gcgtggcagggacacaacctgcgccgggtcacccaccgcctgggcatcgacgtcgacacc
ccgtggcaggacctcgcggaggccgaccggcagtggctgctgttcaccgacgagcggccg
gcggtgctgatccggccggcggacaaggacggcggcggcggacgcgactacatgggcacc
ttccgcagcgcgcgggcccacgtccaccacgtgctcgcgacgtcgtcgagcgagaaggcg
cgccgcgacatggagcgcttcatgcgcagcacgccctgcgaggcgtgcgggggtgcgggg
ctgcgtccggaggcgctggcggtgacgttcgacggtcgcaccatccgcgagctcagctgc
tcgaccatcgtcgagctcgagcaggtcctgcgctcgcgcgcgcacggcgacgacgtcgcg
gcgcgcctgtgcgccgacatggccggccggctcgaggtgctggtgcgcctcggcctcggc
tacctctccctcgaccgtccctccacgacgctgtcgtcgggcgaggcccagcggctgcgg
atcgcgacccagctgcgcgcgggcctgttcggggtggcgtacgtcctcgacgagccgtcc
gccggcctccaccccgccgaggccgagccgctgctcgacgtcctcgagcagctgaaggcc
ggcggcaactcggtcctcgtggtcgagcacaacctcgacgtgatccggcgggccgactgg
atcgtcgagatcgggcccggcgcgggcgcggcgggcggccgcgtggtccacagcggcccg
ctcgcggggctcgagggggtcgagggctcggcgaccgcgccgttcctcttcggcggcgca
cggcccgacggccacgcgacccggacgccgtcgcgctggttcgaggccgacgacgtcgcc
gtgcacaacctccagcacctcgacgtccgcgtcccgctggacgcgctcaccgtcgtcacc
ggcctctcgggggccggcaagtccaccctgctccacggcgtgctcgggcgctccgtccgt
gacctgctcgacggccacgcaggggaggcggcggagatcggcgaggtgcgcggtgccgag
caggtcgaccggctcgtcgtcgtcgaccagcggcccatcggccgtacgccccgctccaac
gtggcgacctacgtcggcctcttcgacaccgtccggaagctcttcgcggagactcccgag
gcgcgccggcgtggctacggcgccggccggttctcgcccaacgtggcgggcgggcgctgc
gaggtctgccgcggcgagggcgtgcagaacgtcgagctgctgttcctgcccggcgtcacc
acgccgtgctcggcgtgccaggggcgcaggttcaacgacgagacgctggagatcacctac
cgcggccacaccgtggccgacgtgctggccctgtcggtcgaccgggcgctggaggtcttc
gacgaggtccccgccgtggcgcgacggctccgggcgctgtgcgacgtgcgtctgggctac
gtccggctgggccagaccgcgatggaggtcagcggtggggaggcgcagcggatcaagctc
gccagtgagctccagcgcgccgaccggggccacgggctctacctcctcgacgagccgacg
accggcctgcacgcctccgacgtcgcggtcctcgccggcctgctgcaccgcctcgtcgac
tcgggcaacaccgtggtggtggtcgagcacgacctctcggtcgtggccggcgcggactgg
gtgatcgacctgggcccggccgggggcgaccagggcggacgggtcgtcgcgaccgggacg
ccgcaggacgtcgcgcgctccggcacgggcgcgacggcggagcacctgcgccgccacctc
gacgcctga
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