Nocardioides okcheonensis: LN652_01975
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Entry
LN652_01975 CDS
T07822
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
noq
Nocardioides okcheonensis
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
noq03051
]
LN652_01975 (pafA)
Enzymes [BR:
noq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LN652_01975 (pafA)
Proteasome [BR:
noq03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LN652_01975 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UFN45012
LinkDB
All DBs
Position
426709..428070
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFKGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVVELVTHDKAGERILEGLLLDAENRLHEEGIAGDIYLFKNNTDSAGNSY
GCHENYLVGRAGEFSKLADILIPFLVTRQIVVGAGKVVMTPRGASYSVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSETTTMLKVASCDLVLRMIEEGVVM
RDLTMENPIRAIREISHDPTGRRKVRLANGREASALEIQAEYLAKARDFVDRRQISTPTI
ERTLDLWERGLKAVESDDLGLVDREIDWVIKLKLIERYRAKHGLSLGDARIAQLDLAYHD
IHRGRGLYYLLEKRGAVARVASDLKIFEAKSVPPQDTRARLRGEFIRKAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFKAYDERVQRLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcggatcttcgggatcgagaacgagtacggcgtcacgtgcacgttcaagggc
cagcgtcggctgagccccgacgaggtcgcgcgctacctgttccgcaaggtcgtgagctgg
ggccgctcgtccaacgtgttcctgcgcaacggcgcccgtctctacctcgacgtgggcagc
caccccgagtacgccaccccggagtgcgacgacgtcgtcgagctggtcacccacgacaag
gcgggcgagcggatcctcgagggcctgctgctcgacgccgagaaccgcctccacgaggag
gggatcgccggcgacatctacctgttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaactacctcgtcggccgggcgggcgagttcagcaagctcgccgacatc
ctcatcccgttcctcgtgacccggcagatcgtggtcggggcgggcaaggtcgtgatgacc
ccgcggggtgcgtcctacagcgtcagccagcgcgcggagcacatctgggagggcgtcagc
agcgccaccacccgcagccggccgatcatcaacacgcgcgacgagccgcacgccgacgcc
gagcggttccgccgcctccacgtgatcgtcggcgactccaacatgagcgagaccacgacg
atgctcaaggtggcctcgtgcgacctggtcctgcggatgatcgaggagggcgtggtgatg
cgcgacctcacgatggagaacccgatccgcgcgatccgcgagatcagccacgacccgacc
ggccggcgcaaggtgcgcctggccaacggacgcgaggcgagcgcgctggagatccaggcc
gagtacctcgccaaggcgcgcgacttcgtcgaccgccgccagatctccacccccaccatc
gagcgcacgctcgacctgtgggagcgcggcctgaaggcggtcgagtccgacgacctcggc
ctggtcgaccgcgagatcgactgggtcatcaagctcaagctcatcgagcgctaccgcgcc
aagcacgggctgtcgctgggggatgcccgcatcgcccagctcgacctcgcctaccacgac
atccaccgcggtcgtgggctctactacctgctggagaagcgcggcgccgtggcccgcgtg
gccagcgacctgaagatcttcgaggccaagagcgtgccgccgcaggacacgcgggcgcgg
ctgcgcggcgagttcatccgcaaggcgcaggagcggcgccgcgacttcaccgtggactgg
gtccacctcaagctcaacgaccaggcccagcgcaccgtgctgtgcaaggacccgttcaag
gcctacgacgagcgcgtgcagcggctgatcgacgggatgtga
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