Nocardioides okcheonensis: LN652_05530
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Entry
LN652_05530 CDS
T07822
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
noq
Nocardioides okcheonensis
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noq03016
]
LN652_05530 (truB)
Enzymes [BR:
noq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LN652_05530 (truB)
Transfer RNA biogenesis [BR:
noq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN652_05530 (truB)
Prokaryotic type
LN652_05530 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
MDMPI_N
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UFN45673
LinkDB
All DBs
Position
complement(1178137..1178994)
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AA seq
285 aa
AA seq
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MAESGLVVVDKSAGLTSHDVVARVRRLAGTRKVGHAGTLDPMATGVLVLGVERATRLLGH
LMLTEKAYDATIRLGASTTTDDAEGEVTATAATDGVDPDDVRDRLARFVGDIEQVPTAVS
AIKVDGKRAYARVRDGEQVELKARPVTVHELVVHDVALPDVRISLRCSSGTYVRAIARDL
GAALGVGGHLTALRRTAVGPFDLAVARTLEQLTDDFGVVPIADAARASFPVVDLDDEQAA
HVRFGRGLDLALPAAGPHAVFAPDGTFLALYEQRGAQARPVAVFV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtccggactggtcgtggtcgacaagtccgcgggcctgacctcccacgacgtc
gtcgcgcgggtgcgccggctcgccggcacccgcaaggtcggccacgccggcaccctcgac
ccgatggccaccggcgtgctggtgctcggcgtcgagcgcgccacgcggctgctcggccac
ctgatgctgaccgagaaggcctacgacgccaccatccgcctcggcgcctcgaccacgacc
gacgacgccgagggcgaggtcaccgcgaccgctgcgacggacggcgtcgaccccgacgac
gtacgcgaccggctcgcccgcttcgtcggcgacatcgagcaggtgccgaccgcggtctcg
gcgatcaaggtcgacggcaagcgggcctacgcccgggtgcgcgacggtgagcaggtggag
ctgaaggcccgcccggtcaccgtccacgagctcgtggtgcacgacgtcgcgctgcccgac
gtccggatctcgctgcgctgctcgtccgggacctacgtccgtgcgatcgcgcgggacctg
ggcgcggccctcggcgtcggcggccacctgaccgcgctgcggcgcacggcggtcggaccg
ttcgacctcgccgtggcccgcaccctcgagcagctcaccgacgacttcggggtggtgccg
atcgcggacgcggcgcgcgcgtcgttcccggtcgtcgacctcgacgacgagcaggccgcc
cacgtccggttcgggcgcgggctcgacctcgcgctcccggcagcggggccgcacgcggtg
ttcgcgccggacgggacgttcctcgcgctctacgagcagcgcggcgcccaggcgcgaccg
gtggccgtcttcgtctga
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