KEGG   Nocardioides okcheonensis: LN652_05965
Entry
LN652_05965       CDS       T07822                                 
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
noq  Nocardioides okcheonensis
Pathway
noq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:noq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LN652_05965 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noq03400]
    LN652_05965 (mutM)
Enzymes [BR:noq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LN652_05965 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LN652_05965 (mutM)
DNA repair and recombination proteins [BR:noq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LN652_05965 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DUF7573 DZR Auto_anti-p27 DUF2688
Other DBs
NCBI-ProteinID: UFN45755
LinkDB
Position
complement(1265319..1266224)
AA seq 301 aa
MPELPEVEVVRAGLERHVVASTITDVEVLHPRPVRRDPRGPEGFAAALTGQRIEAVRRRG
KYFWLALANGDALLGHLGMSGQMLLHEPGADDERHLRVRFGLAVPTPHAEGAPAAPAGRL
EMRFVDQRMFGGLAVSAGGADLPSEIAHIARDPLDPDFDDAEFVRRARRRTSGIKRLLLD
QGLVSGVGNIYADESLWRARLHGERPGDRLSGPVLRGLLGHVRDVMGQALAQGGTSFDAL
YVNVNGESGYFDRSLDAYGREGEPCRRCGTPIRRVAFMNRSSYFCPTCQRPPRGGRRAGP
R
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgcccgagctcccggaggtcgaggtcgtccgtgccggcctcgagcggcacgtcgtggcg
agcaccatcaccgacgtcgaggtcctgcacccgcggccggtgcgtcgcgacccccgtggc
ccggagggcttcgcggcggcgttgaccggccagcggatcgaggccgtgcggcgccgcggc
aagtacttctggctggccctggccaacggggacgcgctgctcggccacctcggcatgagc
gggcagatgctgctgcacgagcccggcgccgacgacgagcggcacctgcgggtccgcttc
ggcctcgccgtgccgacgccccacgccgagggcgcaccggccgcgcccgccggccggctc
gagatgcgcttcgtcgaccagcgcatgttcggcgggctcgcggtctcggcgggcggtgcg
gacctgccgtccgagatcgcccacatcgcccgcgacccgctcgacccggacttcgacgac
gcggagttcgtgcggcgggcccgacggcgtacgtccgggatcaagcggctgctgctcgac
cagggcctcgtgtccggggtcggcaacatctacgccgacgagtcgctgtggcgggcgcgg
ctgcacggcgagcggcccggtgaccggctgtccgggccggtgctgcgcgggctgctcggc
cacgtccgcgacgtcatgggacaggcgctcgcccagggcgggacgtcgttcgacgcgctc
tacgtcaacgtcaacggcgagtcgggctacttcgaccgctccctcgacgcctacggccgg
gagggcgagccctgccggcgctgcggcaccccgatccgtcgggtcgcgttcatgaaccgc
tcctcctacttctgccccacctgccagcgcccgccccgcggcggacgacgcgccggcccc
cgttga

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