Nocardioides okcheonensis: LN652_06050
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Entry
LN652_06050 CDS
T07822
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
noq
Nocardioides okcheonensis
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noq03032
]
LN652_06050
03036 Chromosome and associated proteins [BR:
noq03036
]
LN652_06050
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_06050
DNA replication proteins [BR:
noq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LN652_06050
Chromosome and associated proteins [BR:
noq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LN652_06050
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LN652_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HC2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UFN45771
LinkDB
All DBs
Position
complement(1280228..1280935)
Genome browser
AA seq
235 aa
AA seq
DB search
MNKSELIDALAARYEGNRKQAAHALESVLDTITREVAKGEKVAITGFGSFEKAVRNARWV
RNPQTGERMKSKKKSVPKFSAGKELKDVISGAKKLPKLTAATMPKPPASVRAAAAAVTGA
TTKSAAPAKKTTATKSAPAKKSSAKKAAPAKKTATKSTAAKKTTATKSAPAKKSSAKKAA
PAKKTSAAKTTAAKTTAAKTTAAKKAPAKKAPAKKAPVKKATATKAPAKKAAKKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcagagctcatcgacgcgctcgccgcgcgttacgaggggaaccgcaagcag
gcggcccacgcactggagtcggtgctcgacaccatcacccgcgaggtggccaagggggag
aaggtcgccatcacgggcttcggctcgttcgagaaggcggtgcgcaacgcgcgctgggtc
cgcaacccgcagaccggcgagcggatgaagtccaagaagaagtccgtgccgaagttctcc
gccggcaaggagctcaaggacgtcatctcgggtgcgaagaagctgcccaagctgaccgcc
gcgacgatgcccaagccgcccgccagcgtgcgcgctgccgcggccgcggtgaccggtgcg
accaccaagtccgccgccccggcgaagaagacgacggcgacgaagtccgcgccggcgaag
aagtccagcgcgaagaaggcggccccggccaagaagacggcgacgaagtcgacggctgcg
aagaagacgacggcgacgaagtccgcgccggcgaagaagtccagcgcgaagaaggccgcc
ccggccaagaagacgtcggctgccaagacgaccgctgccaagaccactgccgccaagacg
accgccgccaagaaggcgcctgccaagaaggctccggccaagaaggctccggtgaagaag
gcgacggccacgaaggccccggccaagaaggccgcgaagaagtcctga
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