Nocardioides okcheonensis: LN652_06860
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Entry
LN652_06860 CDS
T07822
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
noq
Nocardioides okcheonensis
Pathway
noq00550
Peptidoglycan biosynthesis
noq01100
Metabolic pathways
noq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LN652_06860 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN652_06860 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
noq01011
]
LN652_06860 (mrdA)
Enzymes [BR:
noq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LN652_06860 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
noq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LN652_06860 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UFN45922
LinkDB
All DBs
Position
complement(1445058..1447178)
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AA seq
706 aa
AA seq
DB search
MRRPSTTGRMRLVVVQVLAFSLFATLFVRLYYLQVIGGDAYQAQAANQSVRDIVVQPQRG
LIVDSQGRPLVANRTSWVISVDRTLLGKLGEGQRTELVRRVADVVSATPEDVEARLVTCG
DPGSVRDVCWNGSPYQPVPVATDVPKKVALRVLEQPEDYPGVLAEQQNVRSYPRPFGINL
AHVLGYLSPVTEDEYDAAAARDDRSLNGASVVGRAGVEKQYDEWLRGLPGYRRVAVDSMG
RVLGDDSMVESTPGDTLVTSIDAKVQAVVERQLAERIKVQRATFDKVTGRNYEADSGAAV
VLDAKTGRVIAMASQPTYDPDVWTGGISEDQLARLYSEKAGTPLLSRATQGQFAPGSTWK
PFMTAGALTNGYSMDTTLPCSSGFQVGNRVFRNHESGAYGTIGFAQALEVSCNTFFYRIG
YDFWQRFGSDPADIDARDPLVEEAKDFGFGSRTGVDLPGEAPGRIADRHWKQAYYESQKD
YYCDLAGKPQTADTSDFVYTFAREFCLEGNLYRAGDAVNFSIGQGDTIVTPLQLARAYAA
LSNGGTLFAPTVAKALVSPEGEVLRRITPKKVAHVDVPQKYLDFIDQALQGVTRTGTMAW
KMIDFPLDQVTVRAKTGSAEVYGKQSTGWVASYTEDYVVVMMISQAGTGSGSTGDGIRKI
WEALYGIDGTDVRAANAATPGTVPPASLPQFLDDGSIMPPVVKAGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcgcccgtcgaccaccgggcggatgcgcctggtcgtggtccaggtgctggcgttc
tcgctgttcgcgacgctgttcgtccggctctactacctccaggtgatcggcggtgacgcc
taccaggcgcaggccgccaaccagtcggtgcgcgacatcgtcgtccagccccagcgcggc
ctgatcgtcgacagccagggccggccgctggtcgccaaccgcacgtcgtgggtgatctcg
gtcgaccggaccctgctcggcaagctcggcgagggccagcgcaccgagctggtccgccgg
gtcgccgacgtggtcagcgcgacgcccgaggacgtcgaggcccgcctggtcacctgcggc
gacccgggcagcgtgcgcgacgtgtgctggaacggctcgccctaccagccggtgccggtg
gcgaccgacgtcccgaagaaggtcgcgctgcgggtgctggagcagccggaggactacccc
ggcgtgctcgccgagcagcagaacgtccggtcctacccccgcccgttcggcatcaacctc
gcccacgtgctcggctacctcagcccggtcaccgaggacgagtacgacgcagccgccgcg
cgcgacgaccgctcgctcaacggcgcctccgtcgtcggccgggccggcgtggagaagcag
tacgacgagtggctgcgcgggctccccggctaccgccgcgtcgcggtcgactcgatgggc
cgcgtgctcggcgacgactcgatggtcgagagcacccccggcgacaccctcgtcacctcc
atcgacgccaaggtgcaggcggtggtggagcggcagctcgccgagcggatcaaggtccag
cgggccacgttcgacaaggtcactgggcgcaactacgaggccgactcgggcgccgccgtg
gtgctcgacgcgaagaccggccgggtgatcgcgatggcgagccagccgacctacgacccc
gacgtgtggaccggtggcatcagcgaggaccagctcgcccggctctactccgagaaggcc
ggcacgccgctgctctcgcgtgccacccagggccagttcgcgcccggctcgacgtggaag
ccgttcatgaccgcgggtgcgctcaccaacgggtactcgatggacaccacgctgccgtgc
tcctcgggcttccaggtcggcaaccgggtcttccgcaaccacgagtccggcgcctacggc
acgatcggcttcgcccaggcgctcgaggtctcgtgcaacacgttcttctaccggatcggc
tacgacttctggcagcgcttcggcagcgacccggctgacatcgacgccagggacccgctg
gtcgaggaggccaaggacttcggcttcggctcgcgcaccggcgtcgacctgcccggcgag
gcgcccggccggatcgccgaccggcactggaagcaggcctactacgagtcgcagaaggac
tactactgcgacctggccggcaagccgcagacggccgacaccagcgacttcgtctacacg
ttcgcgcgcgagttctgcctcgagggcaacctgtaccgcgccggcgacgccgtgaacttc
tcgatcggccagggcgacaccatcgtcacgccgctccagctggcccgtgcctatgcggcg
ctctccaacggaggcacgctgttcgcgccgacggtcgcgaaggcgctggtcagccccgag
ggcgaggtgctgcgtcggatcaccccgaagaaggtcgcccacgtcgacgtcccgcagaag
tacctcgacttcatcgaccaggcgctccagggcgtcacgcgcacgggcacgatggcgtgg
aagatgatcgacttcccgctcgaccaggtcacggtccgcgccaagaccggctcggcggag
gtctacggcaagcagtcgaccggctgggtcgcgtcctacaccgaggactacgtcgtggtg
atgatgatcagccaggccggcaccggctccgggtcgaccggcgacggcatccgcaagatc
tgggaggcgctctacggcatcgacggcaccgacgtccgcgcggcgaacgcggccacgccc
ggcaccgtgcctccggcgtcgctgccgcagttcctcgacgacggctcgatcatgccgccc
gtcgtgaaggcaggggagtga
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