Nocardioides okcheonensis: LN652_09705
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Entry
LN652_09705 CDS
T07822
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
noq
Nocardioides okcheonensis
Pathway
noq02024
Quorum sensing
noq03060
Protein export
noq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LN652_09705 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LN652_09705 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN652_09705 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
noq02044
]
LN652_09705 (secD)
Secretion system [BR:
noq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LN652_09705 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UFN46457
LinkDB
All DBs
Position
complement(2007693..2009975)
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AA seq
760 aa
AA seq
DB search
MSRGVWIRFVLVLGLLAGCVALAINVKPNLGLDLKGGAQFVFEAEGTDQTPATSENVDKT
LSVLRGRVDALGVAESTLVRQGENRILVELPGVTSDEEAQDAEDRIGQTAKLTIHEVLKT
AEPDAKPDKKGNQVLPSDQGDTLEIGPTVIPGDEITSAAAEQPQQSVEWVVSIDFNGKGG
NTWADITGKAACNPSGDPKRRIAIVLDGEIISSPEVQTTVGCDVGIRGGGTQITGSYTSE
QASDLAALIEGGSLPLELRAISDRLVGPSLGAAAIDASIEAGIIGIILTGLFIIVVYRLV
GFAATIALASYALLAYAMLVGLGSTLTLPGLAGFVLAIGMAIDANVLVFERAREEYVAYP
SAGLRRALAVGFNKAWSAIIDSNVTTLLAAGLLFFLGSGPIKGFGVTLTIGVVASMISAL
IVARVLCDLAVANRPVSRHPAVSGLGNVGRVRTWLDRKNPDIMKRRKTWVGVSAAALVLA
IAGIATQGLQLGVEFTGGRQLDYSVSKDISVDQAREAVTAAGFSEAVVQTADTGFTVRTG
NISNDEEQAIEAELAKVGGAVDKIDDQTIGSSLGRELRNNALIAFGVAFLAQLLYLAIRF
KWTFGVAAVLAMAHDVILVVGLFAWLQKPIDGIFLAAAMTIVGLSVNDTVVVFDRIRERW
WGSKPEENFTDVANKACVETVPRTVNTGLGAMFILAALAVLGGDSLQDFAIALLVGLIVG
TYSSVFLATPLLTYFQEKAPMSRVKKEKVARAPEDSGAVV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtggtgtgtggatccgcttcgtcctcgtcctcggcctgctggccgggtgcgtg
gcgctggcgatcaacgtcaagcccaatctcggtctggacctcaagggcggcgcgcagttc
gtcttcgaggccgagggcaccgaccagacgccggccacctcggagaacgtcgacaagacg
ctcagcgtgctccgcggccgcgtcgacgcgctcggcgtcgcggagtcgacgctggtgcgc
cagggcgagaaccggatcctcgtcgagctgcccggcgtgacctccgacgaggaggcgcag
gacgccgaggaccggatcggccagaccgccaagctgaccatccacgaggtcctcaagacc
gccgagcccgacgcgaagcccgacaagaagggcaaccaggtcctgccgtccgaccagggc
gacaccctcgagatcggccccacggtcatccccggcgacgagatcacctccgctgcggcc
gagcagccgcagcagagcgtcgagtgggtcgtctcgatcgacttcaacggcaagggtggc
aacacctgggccgacatcaccggcaaggccgcctgcaacccgtccggcgaccccaagcgc
cggatcgcgatcgtgctcgacggcgagatcatctcctcgcccgaggtgcagaccacggtc
ggctgcgacgtcggcatccgcggcggcggcacccagatcaccggctcctacacgtccgag
caggcgagcgacctcgccgccctgatcgagggcggttcgctgccgctggagctcagggcc
atctccgaccgcctcgtcggcccctcgctcggcgccgcggcgatcgacgcctccatcgag
gccggcatcatcggcatcatcctgaccggcctgttcatcatcgtcgtctaccgcctggtc
ggcttcgccgcgaccatcgcgctcgcgtcgtacgccctgctcgcctacgcgatgctcgtc
gggctcgggtcgacgctgacgctgccgggactcgccggcttcgtgctcgcgatcggcatg
gcgatcgacgccaacgtgctcgtcttcgagagagccagggaggagtacgtcgcgtacccc
tccgccggccttcggcgagcgctcgcggtcggcttcaacaaggcgtggagcgcgatcatc
gactccaacgtcaccaccctgctggccgccggcctgctgttcttcctcggctccggcccg
atcaagggcttcggcgtgacgctgaccatcggtgtcgtcgcgtcgatgatctcggcgctg
atcgtcgcccgcgtgctgtgcgacctcgccgtcgccaaccgaccggtgtcccgccacccg
gcggtcagcggcctcggcaacgtcggccgggtccggacctggctggaccgcaaaaacccc
gacatcatgaagcgccgcaagacctgggtcggcgtctcggccgcggccctcgtgctcgcc
atcgccggcatcgcgacgcagggtctccagctcggcgtcgagttcaccggcggacgccag
ctcgactactcggtcagcaaggacatctcggtcgaccaggcccgcgaggccgtgaccgcc
gccggcttctccgaggccgtggtgcagaccgccgacaccggcttcaccgtccgcacgggc
aacatctccaacgacgaggagcaggccatcgaggccgagctcgccaaggtcggcggcgcg
gtcgacaagatcgacgaccagacgatcgggtcctcgctgggccgggagctgcgcaacaac
gcgctcatcgccttcggcgtcgcgttcctcgcccagctgctctacctcgcgatccggttc
aagtggaccttcggcgtcgccgcggtgctcgcgatggcccacgacgtgatcctcgtggtc
ggcctcttcgcgtggctgcagaagcccatcgacggcatcttcctcgccgccgcgatgacg
atcgtcggtctgtcggtcaacgacacggtcgtcgtcttcgaccgcatccgtgagcggtgg
tggggatcgaagccggaggagaacttcaccgacgtcgccaacaaggcgtgcgtggagacc
gtgccccgcacggtcaacaccggcctcggcgcgatgttcatcctcgccgcgctcgccgtc
ctcggcggcgactcgctgcaggacttcgcgatcgcgctgctcgtcggcctgatcgtcggc
acctactcctcggtcttcctcgccacgccgctgctgacgtacttccaggagaaggccccg
atgagccgggtgaagaaggagaaggtcgcccgcgcgccggaggactcgggcgcggtcgtc
tga
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