Nocardioides okcheonensis: LN652_09930
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Entry
LN652_09930 CDS
T07822
Name
(GenBank) tandem-95 repeat protein
Organism
noq
Nocardioides okcheonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CshA_repeat
Big_9
Cadherin_5
DUF7507
Cadherin_4
HYR
CARDB
Motif
Other DBs
NCBI-ProteinID:
UFN46495
LinkDB
All DBs
Position
complement(2051422..2056791)
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AA seq
1789 aa
AA seq
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MPFSRLVRSVVATALAAAGLQVAALGVAPSASAAPPADCVNALYLTANSGGGRVLRLDLA
TQTLGTTSVYTPVTASGNNPNQLGIGPDGNRAINTDRTTNQIVNRNLLTDTTQTAGSAAI
AGLGIAGAINPADGLYYFGGYSGGNLVLHSYDPVANTASANPVATISVPNAPASGTNGDI
SFDPSGNLYFVSSSTSDFALYSKAGPSPTSGAATRLAGDSGLGGAAVNGIAFGSDGFLYI
GQALQVRQVNPVTGAQTGTTVTLPAGTSSTDLASCAAAPTSLTVKASVSDRHAATDQFVV
TAVRPAADGTSSFPVGTTAGDDDGVQDDPAEVAGPAIVFPGNEYTFTQTASGTTDLARYT
TTWSCADATGTVVADGTGSSGTFTAPGGGAGVTCVFTNTPINPAITLDKSVSPTRFNAAG
ETLTYTFAISNTGNAALSNLTLDDGMSGLGTPTCTPVDLGASLAAGQSTTCTATYTTTPA
DVSAAANKSNTATASGTPPNGLPTATSPSSTATATFVGQPVATDDSRNTRFDTPVTLPGS
TNDTPGDPAGNVVHASTVFTSAAATNGGKTLVTAQGTWQVNPGGTVTFTPAPGYVGTTPA
VEYRITDGDGGTDTADLVVTVRSGPSAAPDEDTTPQGVQVVLDPAALTNDTPSLAADGTA
GSFDPSSLVFTVGGTPGGVVSDGGKTLTIAGQGVFTVGTGGAVTFDPEPAFVGTTTAAAY
TVTDDAGNETGSTIRIVVTDVAPVADDDFGSTPFDQPITLEGMTDDAPGDPGVALVPAST
VFTSAAATNGGKTLVTAQGTWQVNPSGSVTFTPAAGYVGTTPLVEYRIADRNGTTDVADL
RVTVRPGPRAQPDSDTTPQGLAVTVDPLTNDTPGPLANGDDGSWVESSVRFPSNGNPGTV
SGNGRTLTVPGEGEYTVDPVTGEITFDPEPQFTATATPVTYVVTDSNGNDASSTLTITVT
PVVPVAEDDSDTTPFDTPVTLPAVTDDAPGHPSIPLVPGGTVLTSAQATNNGKTLVTTEG
TWQVNPNGTVTFTPADGYTGTTAPVEYRIVDQNGTSDEALLTVRVAAGPLADPDTDTTLQ
NTPITVDVVSDDTPGAGETFDRTSVVFEAGRNPGTVSNNGTTLTVPDEGVYTIDPVTGDV
TFTPEADFSGPATSVTYTVTDSAGNDAFATLTITVTAVVPVANDDSASTPFNTPVTLPAV
TDDDAGDPSAPLVPGDTVLTSAQATNNGKTLVTAEGTWQVNADGSVTFTPAAGYVGTTPA
VEYRITDANGTTDEAQLVVTVRPGPQAAQDVDTTPQGVAVTVDPLTNDTPGPLANGDDGS
WVESSVRFPSNGNPGTVSGNGRTLTVPGEGEYTVDPVTGEVTFDPEPQFAGVATPVTYVV
TDSNGNDASSTITITVTPVVKLANDDAAGTPFNTAVTLPAVTDDAPGAASAPLVPGATVF
TSAQATNNGKTLVTAEGTWQVNADGTVTFTPRSGYHGTTAPVEYRIADTNGTTDTAFLTV
TVRPAPQAIPDTGTTPQDTDITVSVLGNDTPGPRGDGSAGSFDPATLVFTSPAATNGGRT
LVVPGEGTYSIDPATGSVTFDPLPGFTGQATPVAYAVTDRSGGTTGSTLTITVTPVAPQA
TDDEGDASPDRTSTAPGDPVTVSVIDNDSAAPGEELDPASVCLLPGTASGKVANGRSQRA
ARCVKGHTEPGVGTWTVNEDGTITFTPADGYTGTASIGYTVEDSGGNVHRSTLTVDVKGD
PDVADNEGTSGPDQVLPDTGGPQLALLVTAFGLVLLGGILLLARRRVTR
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctcacgtctcgtccgctccgtcgtggcgaccgccctggcggccgccggcctg
caggtcgctgcgctcggcgtcgctccgtccgcctcggccgcaccgccggccgactgcgtg
aacgcgctctacctgaccgcgaactccgggggtggccgcgtgctgcggctcgacctggcg
acccagacgctcgggacgacgtcggtctacacgccggtcaccgccagcggcaacaacccg
aaccagctcggcatcggtccggacggcaaccgtgcgatcaacaccgaccggacgaccaac
cagatcgtcaaccgcaacctcctcacggacacgacccagaccgccggtagcgcggccatc
gccggcctcggcatcgccggcgcgatcaaccccgccgacggtctctactacttcggcggc
tactccggcggcaacctggtcctccactcctacgacccggtcgcgaacaccgcctccgcg
aacccggtcgcgacgatctcggtcccgaacgctcccgccagcggcaccaacggcgacatc
tcgttcgacccctccggcaacctctacttcgtctcgtcctccaccagtgacttcgcgctg
tactccaaggcgggtccctcgcccacgtccggggccgcgaccaggctcgccggtgacagc
gggctcggtggcgcagccgtcaacggcatcgccttcggcagcgacggcttcctctacatc
ggccaggcgctgcaggtccgtcaggtgaacccggtcacgggcgcgcagaccggcaccacc
gtcaccctgcccgcgggcacgagcagcacggacctggcatcctgcgcggccgcgcccacc
agcctgacggtcaaggcgagtgtctcggaccgccatgctgcgaccgaccagttcgtcgtg
acggccgtccggccggcggctgacggcacctcgagcttcccggtcggcacgacggcaggc
gacgacgacggcgtccaggacgacccggccgaggtggccggcccggccatcgtgttcccg
ggcaacgagtacacgttcacccagaccgcgagcggcacgaccgacctcgcgcgctacacg
accacctggtcgtgcgccgacgccaccggcacggtcgtcgccgacggcaccggctcgagc
ggcaccttcacggcccccggcggcggcgccggcgtcacgtgcgtcttcaccaacacgccg
atcaacccggccatcacgctggacaagtcggtctcgcccacccggttcaacgcggccggc
gagacgctcacctacaccttcgcgatcagcaacaccggcaacgccgcactctcgaacctg
accctcgacgacggcatgagcggcctcggcaccccgacctgcaccccggtcgacctcggc
gcgagcctcgccgcgggccagtcgaccacctgcaccgcgacctacaccaccacgccggcc
gacgtgtccgcagccgcgaacaagtccaacacggccaccgcctccggcaccccgcccaac
gggctcccgaccgccacctctccgtcctcgacggccacggcgaccttcgtcgggcagccg
gtcgcgaccgacgacagccgcaacacacgcttcgacaccccggtgacgctgccgggcagc
accaacgacaccccgggcgacccggccggcaacgtcgtgcacgcctcgacggtcttcacc
tcggccgccgcgaccaacggtggcaagaccctggtcacggcgcagggcacgtggcaggtc
aaccccggcggcaccgtcaccttcacccctgctcccgggtacgtcggcacgacgccggcc
gtggagtaccgcatcaccgacggcgacggcggcaccgacaccgccgacctcgtggtcacc
gtgcgcagcggcccgtccgccgcgccggacgaggacacgaccccgcagggggtccaggtc
gtgctcgaccccgcggcgctgaccaacgacacccccagcctcgccgctgacggcaccgcc
ggcagcttcgacccctcgagcctcgtcttcaccgtcggcggcacgcccggtggcgtggtg
agcgacggcggcaagaccctcaccatcgccggtcagggcgtcttcacggtcggcacgggc
ggcgcggtcaccttcgaccccgagcccgcgttcgtcggcacgacgaccgccgcggcctac
accgtcaccgacgacgcgggcaacgagaccggctcgacgatccgcatcgtcgtcacggac
gtggccccggtggccgacgacgacttcggcagcacgcccttcgaccagcccatcaccctc
gagggcatgacggacgacgcccccggtgacccgggcgtcgcactggtgcccgcctcgacc
gtgttcacctccgctgccgcgaccaacggtggcaagaccctggtcacggcgcagggcacc
tggcaggtcaaccccagcggctcggtcaccttcaccccggccgccggctacgtcggcacc
accccgctcgtcgagtaccggatcgccgaccgcaacggcaccaccgacgtcgccgacctc
cgcgtcaccgtgcgccccggcccgcgggcccagcccgacagcgacaccactccgcagggc
ctcgccgtcaccgtcgacccgctgaccaacgacacccccggccccctggccaacggcgac
gacggctcgtgggtcgagtcctcggtccggttcccgagcaacggcaacccgggcacggtc
tccggcaacggcaggaccctgacggtccccggtgagggcgagtacacggtcgacccggtc
accggtgagatcaccttcgacccggagccgcagttcaccgccacggccaccccggtgacg
tacgtcgtcaccgacagcaacggcaacgacgcgagctccaccctcacgatcaccgtgacc
ccggtggtcccggtcgcggaagacgattcggacaccacgccgttcgacaccccggtgacg
ctgccggccgtgacggacgacgcccccggtcacccgtcgatcccgctcgtcccgggtggc
accgtgctcacctccgcgcaagcgacgaacaacggcaagaccctggtcacgaccgagggc
acctggcaggtcaacccgaacggcaccgtcaccttcaccccggccgacggctacaccggc
acgaccgccccggtggagtaccggatcgtcgaccagaacgggacctccgacgaggcactc
ctgaccgtgcgcgtggccgcaggtccgctcgcggaccccgacaccgacacgacgctccag
aacacgccgatcacggtcgacgtcgtctccgacgacaccccgggcgcgggcgagacgttc
gaccgcacgagcgtcgtcttcgaggcgggccgcaaccccggcacggtctcgaacaacggc
acgaccctgaccgtgcccgacgagggcgtctacacgatcgacccggtcaccggggacgtc
accttcacgcccgaggccgacttctccgggcccgccacctcggtgacctacacggtgacc
gacagcgccggcaacgacgccttcgcgaccctgacgatcaccgtcacggcggtcgtcccg
gtggccaacgacgactccgccagcacgccgttcaacaccccggtgacgctgccggccgtg
acggacgacgacgcgggcgacccgtccgcaccgctcgtgccgggcgacaccgtcctcacc
tccgcgcaggccacgaacaacggcaagaccctggtcacggccgagggcacgtggcaggtc
aacgccgacggctcggtgaccttcacgccggccgccggctacgtcggcacgacgccggcc
gtcgagtaccggatcaccgacgcgaacggcaccaccgacgaggcgcagctggtcgtcacc
gtccgacccggcccgcaggccgcgcaggacgtcgacaccaccccgcagggcgtcgccgtc
accgtcgacccgctgaccaacgacacccccggccccctggccaacggcgacgacggctcg
tgggtcgagtcctcggtccggttcccgagcaacggcaacccgggcacggtctccggcaac
ggcaggaccctgacggtccccggtgagggcgagtacacggtcgacccggtcaccggtgag
gtcaccttcgacccggagccgcagttcgccggcgtggccaccccggtgacgtacgtcgtc
accgacagcaacggcaacgacgcgagctccacgatcacgatcaccgtgaccccggtggtc
aagctcgccaacgacgacgcggcaggcaccccgttcaacacggcggtgacgctgccggcc
gtgacggacgacgcccccggcgccgcctcggcaccgctcgtcccgggcgcgacggtgttc
acctccgcgcaggcgacgaacaacggcaagacgctcgtcaccgccgagggcacgtggcag
gtcaacgccgacggcaccgtgaccttcaccccgcggagcggctaccacggcacgaccgcg
cccgtggagtaccggatcgccgacaccaacgggacgaccgacaccgccttcctgacggtc
acggtgcgccccgcgccgcaggccatcccggacacgggcaccaccccgcaggacaccgac
atcaccgtgtcggtgctcggcaacgacaccccgggcccccgcggtgacggttccgccgga
tccttcgacccggccacgctggtgttcacctcgccggccgcgaccaacggcggtcgcacc
ctggtggtgcccggcgaggggacctactcgatcgacccggccaccgggagcgtcaccttc
gacccgctgcccggcttcaccggccaggccacgcccgtggcgtacgcggtgaccgaccgc
agcggcggcacgaccggctcgaccctcaccatcacggtgacgcctgtcgccccgcaggcg
accgacgacgagggtgacgcttcaccggaccgcacgtcgaccgccccgggcgacccggtc
accgtctcggtgatcgacaacgactcggccgcccccggcgaggagctcgaccccgcgtcg
gtctgcctcctgcccggcaccgcgtccggcaaggtcgcgaacggcaggtcgcagcgcgcc
gcgaggtgcgtcaagggccacaccgagcccggtgtggggacctggaccgtcaacgaggac
ggcacgatcaccttcacgcccgctgacggctacaccggcaccgcgtcgatcggctacacg
gtcgaggactccggcggcaacgtccacaggtccacgctgacggtcgacgtgaagggcgac
ccggacgtcgcggacaacgagggcaccagcggccccgaccaggtcctgcccgacaccggt
ggcccgcagctcgcgctgctggtcacggcgttcggcctggtcctcctcggcggcatcctg
ctgctggcccgtcgccgcgtgacccgctga
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