Nocardioides okcheonensis: LN652_13170
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Entry
LN652_13170 CDS
T07822
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
noq
Nocardioides okcheonensis
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noq03032
]
LN652_13170 (gyrA)
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_13170 (gyrA)
Enzymes [BR:
noq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LN652_13170 (gyrA)
DNA replication proteins [BR:
noq03032
]
Prokaryotic type
DNA Topoisomerases
LN652_13170 (gyrA)
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LN652_13170 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
UFN43010
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Position
2717727..2720417
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AA seq
896 aa
AA seq
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MTEIPTDNAGGGDGFGFGDDRIQPIELQTLMQQSYIDYAMTVIVGRALPDVRDGLKPVHR
RILYAMYDGGYRPDRGFSKCSRVVGDVMGQYHPHGDTAIYDTMVRLAQPWVLRAPLINGQ
GNFGSPGNDSAAAMRYTECRMAPLAMEMVRDIDEDTVDFRPNYDGRSQEPTILPSRFPNL
LVNGSAGIAVGMATNIPPHNLREVAEGATWALEHPDATKEELQDALVERIKGPDFPNGAL
IVGRQGIEQAYRTGRGSITQRAVVEIDEDAKGRVMLVISELPYMVNPDNLALKIAELADS
GRIQGISDVRDDTSSRTGQRLVIILKRDAVARVVLNNLFKHTELQSNFSANMLALVDGVP
RTLPIDQFISNWVTHQIEVIQRRTRFRLAEAERQAHIYRGLAKALDALDEVIALIRRSPD
VEEARSGLIRLLDIDEVQANAILEMQLRRLAALERQKIMDRLAELERVIADLEDILANEP
RQRQIVADELKEITDKYGDERRTQIIAADGDLSMEDLIPDEDLVVSITRGGYAKRTRADQ
YRLQKRGGKGVRGATLRGDDVVQHFISTTNHHWLLFFTTAGRVYRTKAYNLPEAARDAKG
GHVAGLLSFQPDEDIAQVLAIRDYEQAPYLVLATRTGLVKKTKLGDYNSPRQAGVIAINF
REDDDELIGAELVNGDDDILLVSRKGQSIRFKADDEQLRPMGRATGGVRGMKFRDGDSLL
SMSVIRAAQVEAEEAVEGDAAESDEVKEQYVFTITDGGFAKRSRISEYRLQSRGGIGIKA
MSLSNEDRGGLVGAFIVEEEDEVLSITSSGQVVRSPIDANFRPTGRSTMGVKFVTPKKGD
TVAVVARSVEAKVVEEAEEAGAESPEVVDGATIDGQDAVEAPADTSPETADENTEE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatccccacggacaacgccggcggcggcgacggcttcggcttcggcgacgac
cgcatccagccgatcgagctgcagacgctgatgcagcagtcctacatcgactacgcgatg
acggtcatcgtcgggcgcgcgctgcccgacgtgcgcgacggcctcaagccggtgcaccgc
cgcatcctctacgcgatgtacgacggcggctaccgccccgaccgcggcttctcgaagtgc
tcgcgcgtcgtcggcgacgtgatgggccagtaccacccgcacggcgacaccgcgatctac
gacaccatggtgcgcctcgcgcagccgtgggtgctgcgcgcgccgctgatcaacggccag
ggcaacttcggctcgccgggcaacgactccgccgccgccatgcgttacaccgagtgccgg
atggcgccgctggcgatggagatggtgcgcgacatcgacgaggacaccgtcgacttccgc
cccaactacgacggtcgctcgcaggagccgaccatcctgccctcgcggttccccaacctg
ctggtcaacggctcggccggcatcgccgtcggcatggcgaccaacatcccgccgcacaac
ctccgcgaggtcgccgagggcgcgacgtgggcgctcgagcacccggacgccaccaaggag
gagctccaggacgcgctcgtcgagcggatcaagggccccgacttccccaacggcgcgctc
atcgtcggccgccagggcatcgagcaggcctaccgcaccggacgcggctcgatcacccag
cgcgcggtcgtcgagatcgacgaggacgccaagggccgggtgatgctcgtcatcagcgag
ctgccgtacatggtcaaccccgacaacctggcgctcaagatcgccgagctcgccgactcc
gggcggatccagggcatctccgacgtccgcgacgacaccagctcgcgcaccggccagcgc
ctggtcatcatcctcaagcgcgacgccgtcgcccgcgtggtgctcaacaacctgttcaag
cacaccgagctgcagagcaacttctccgccaacatgctggcgctggtcgacggcgtgccg
cgcacgctgccgatcgaccagttcatctccaactgggtcacccaccagatcgaggtcatc
cagcggcgtacgcgcttccgcctcgccgaggccgagcgccaggcccacatctaccgcggc
ctcgccaaggccctcgacgcgctcgacgaggtgatcgccctcatccggcgcagccccgac
gtcgaggaggcccgcagcggcctgatccggctgctcgacatcgacgaggtccaggccaac
gcgatcctcgagatgcagctgcgccgcctcgcggccctcgagcggcagaagatcatggac
cgcctcgccgagctcgagcgcgtgatcgccgacctcgaggacatcctggccaacgagccc
cgccagcggcagatcgtcgccgacgagctcaaggagatcaccgacaagtacggcgacgag
cggcgcacgcagatcatcgccgccgacggcgacctgtcgatggaggacctgatccccgac
gaggacctcgtcgtctccatcacccgcggcggctacgccaagcgcacccgcgccgaccag
taccggctgcagaagcgcggcggcaagggcgtacgcggggcgacgctgcgcggcgacgac
gtcgtgcagcacttcatctccaccaccaaccaccactggctgctgttcttcaccaccgcc
ggtcgggtctaccgcacgaaggcctacaacctccccgaggcggcccgcgacgcgaagggc
ggccacgtggccggcctgctgagcttccagcccgacgaggacatcgcccaggtgctggcg
atccgcgactacgagcaggcgccctacctcgtgcttgccacccggaccggactggtcaag
aagaccaagctcggcgactacaacagcccgcgccaggccggcgtcatcgcgatcaacttc
cgcgaggacgacgacgagctgatcggcgccgagctggtcaacggcgacgacgacatcctg
ctggtgtcccgcaagggccagtcgatccggttcaaggccgacgacgagcagctgcgtccg
atggggcgcgccaccggcggcgtacgcggcatgaagttccgcgacggcgactcgctgctg
tcgatgtcggtgatccgcgccgcgcaggtcgaggccgaggaggccgtcgagggcgacgcc
gcggagtccgacgaggtgaaggagcagtacgtcttcaccatcaccgacggcggcttcgcc
aagcgcagccggatctcggagtaccgcctgcagtcgcgcggcggcatcggcatcaaggcg
atgtcgctgtccaacgaggaccgcggcggcctggtgggcgcgttcatcgtcgaggaggag
gacgaggtcctctcgatcacgagcagcgggcaggtcgtgcggagcccgatcgacgccaac
ttccgtcccacgggtcgctccaccatgggcgtgaagttcgtgacgccgaagaagggcgac
acggtggccgtggtggcccgctcggtcgaggcgaaggtcgtcgaggaggccgaggaggcc
ggcgccgaatcgcccgaggtggtcgacggtgcaacaatcgatggtcaggacgccgtcgag
gcgcccgccgacaccagtcccgagaccgccgacgagaacaccgaggagtga
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