Nocardioides okcheonensis: LN652_14305
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Entry
LN652_14305 CDS
T07822
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
noq
Nocardioides okcheonensis
Pathway
noq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LN652_14305 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_14305 (recC)
Enzymes [BR:
noq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LN652_14305 (recC)
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LN652_14305 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UFN43215
LinkDB
All DBs
Position
complement(2938565..2941921)
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AA seq
1118 aa
AA seq
DB search
MTLHLHTAERTDALAGALGDLLAVPLADPFAREVVVVPARGVERWLTQRLSHRLGTGPRG
SDGVCAGVDFVSPHSLVSMLLDRDAEDPWSPDRLAWPLLAVIDDALGSPGFADLTRHLGG
GDPADERSARRYSVARRLAALFASYAVQRPALLADWREGRDSDGAGGRLDDDLRWHAELW
RRLLDAVGDQPPDVRHAATLDRLRAGGGDPAGLDLPPRLSLFGHTRLPETEVSLLAALGE
VRDVHLWLPQASTALWQALAPFAAEGPVPRAGDRSADAVGHPLLGSLGRDARELRRTLGD
LPTEPAGPPPVAPDTLLGWLQADLRANHAPDPDERAARGGVDDSVQVHACHGSARQVDVL
REVLVGLLEDDPTLEPRDILVMVPDIETFAPLISAAFGMADVAGEGAGHPGHQLRVRLAD
RSLAATNPLLALAAQLVELVRGRMTASQVLDVAGADPVRSRFGFGDDELERISHWVQESG
IRWGYDGHHRGAFGLEGLEANTWVAGLRRVLLGAAMSGLDHRQVSGTVPVDDVSDGDLDL
VGRFAEMVERLHAFVDAAERAQTVTDWTSAVSEAVHRLTSTPPTEVWQVAQFDREVARIA
AGAADTGTTLRQADVRALLRQRLRGRPTRSNFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
GVFPRVSTVDGDDVLARRPRTGERDLRAEDRQLFLDAIVSATDKLVITYTGRGEHNGAER
PPAVPLGELLDALDRTAAAPVRDHVLTQHPLQPFDEGNFVAGRLRPGGPFTFDRFALAGA
TAARHDRAPVRVLVPDPLPAPASADGDVSLADLHDFLAHPVRGFFRRLRIARPYDADEVK
DAIPITLDALEKWAVGDRIVSHVMAGADPQAAMVAEQLAGTLPPGGLGVGVLTDVVTHAR
PLVEAAQRLRRGAHRTLDVDIDLGGGRRLSGTVSDVWGNNAVSVSFSNLGAKHRLAAWLD
ALALGAGLPDENWTVHTIGKHRSGGQVQQVAPLAQHEAEQWLRDLVALYDLGQREPLPMP
VKTSLAWAEELRRVRAGSDGDPDVKARAEWETPRFNDAGFPKEDADPWHVRAFGEHADLG
LLAAPPRPGEDGPHRLGHFAWRLWGPLIDGGHAQVRGL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctccacctgcacaccgccgagcggaccgacgcgctcgcgggtgccctcggcgac
ctgctcgccgtcccgctggcggaccccttcgcccgcgaggtggtcgtggtccccgcccga
ggcgtcgagcggtggctcacccagcggctctcgcaccggctcggcaccggtccccgcggc
tcggacggcgtgtgcgcgggcgtcgacttcgtctcgccccactcgctcgtgtcgatgctc
ctcgaccgtgacgccgaggacccctggagccccgaccggctggcgtggccgctgctcgcg
gtgatcgacgacgcgctcggctccccgggcttcgccgacctgacccgccacctcggtggc
ggcgacccggccgacgagcgcagcgcgcgccgttactccgtcgcccgacggctggccgcc
ctcttcgcctcctacgcggtgcagcgcccggccctgctggccgactggcgcgagggccgc
gactccgacggggccggcggtcggctcgacgacgacctgcggtggcacgcggagctctgg
cgacggctgctcgacgccgtcggcgaccagccccccgacgtccgtcacgccgcgacgctc
gaccggctccgcgccggcgggggcgacccggccggcctcgacctgccgccgcggctctcc
ctcttcggccacacccggctccccgagaccgaggtgtcgctgctcgccgcgctcggcgag
gtccgcgacgtccacctctggctcccccaggcctccaccgcgctctggcaggccctcgcg
ccgttcgccgccgaggggccggtgccgcgcgcgggcgaccgctcggccgacgcggtcggc
cacccgctcctcggctcgctcgggcgcgacgcgcgcgagctgcgacgcacgctgggcgac
ctgcccaccgagccggccggaccaccgcccgtcgcgccggacaccctgctcggctggctg
caggccgacctccgcgccaaccacgcccccgacccggacgagcgggccgcgcgcggcggc
gtcgacgactcggtccaggtgcacgcctgccacggctccgcgcgccaggtcgacgtgctc
cgcgaggtgctggtgggcctgctcgaggacgacccgacgctcgagccgcgcgacatcctc
gtgatggtccccgacatcgagaccttcgccccgctgatctcggcggccttcggcatggcc
gacgtggcgggcgagggcgcgggccacccgggccaccagctgcgggtccgcctcgccgac
cgctcgctcgccgccaccaaccccctgctcgcgctggccgcccagctcgtcgagctcgtg
cggggccggatgaccgcgagccaggtgctcgacgtcgcgggcgccgacccggtgcggagc
cggttcggcttcggcgacgacgagctcgagcggatctcccactgggtgcaggagagcggc
atccggtggggctacgacgggcaccaccgcggggccttcggcctcgaggggctcgaggcc
aacacctgggtggccggcctgcgtcgggtgctgctcggcgctgccatgtcgggcctcgac
caccgacaggtctccggcaccgtgccggtcgacgacgtgagcgacggcgacctcgacctg
gtcggccgcttcgccgagatggtcgagcggctgcacgccttcgtcgacgcggccgagcgc
gcgcagaccgtgaccgactggacgagcgccgtctccgaggcggtgcaccggctcacctcg
acgccgccgaccgaggtctggcaggtcgcccagttcgaccgcgaggtcgcgcggatcgcg
gccggcgccgccgacaccggcacgaccctgcgccaggccgacgtgcgcgcgctcctgcgc
cagcgcctgcgcgggcgtccgacccgctccaacttccgcaccggcaccctcaccgtctgc
acgatggtgccgatgcgctcggtgccgcaccgcgtcgtgtgcctggtggggctcgacgac
ggcgtgttcccgcgggtgtcgacggtcgacggcgacgacgtcctcgcgcgccgcccgcgc
accggcgagcgcgacctccgcgccgaggaccgccagctcttcctcgacgcgatcgtctcg
gccaccgacaagctggtcatcacctacaccggtcgcggcgagcacaacggcgccgagcgt
ccgcccgccgtgccgctcggcgagctgctcgacgcgctcgaccgcacggcggcggcgccg
gtgcgcgaccacgtcctcacccagcacccgctccagccgttcgacgagggcaacttcgtg
gccggccggctgcgccccggcggcccgttcacgttcgaccggttcgcgctcgccggggcc
accgcggcccgccacgaccgcgccccggtgcgggtgctcgtgcccgacccgctcccggcg
cccgcgtcggccgacggtgacgtgtcgctggccgacctgcacgacttcctcgcccacccg
gtacgcggcttcttccggcggctgcggatcgcccggccctacgacgccgacgaggtcaag
gacgccatcccgatcaccctcgacgcgctggagaagtgggcggtcggggaccgcatcgtc
tcccacgtgatggccggcgccgacccgcaggccgccatggtcgccgagcagctcgccggc
accctcccgccgggcggcctcggcgtcggcgtgctcaccgacgtggtcacccacgcccgc
ccgctggtcgaggccgcccagcggctgcgccgcggcgcgcaccgcacgctcgacgtcgac
atcgacctgggcggcgggcggcgcctgtccgggacggtgagcgacgtgtggggcaacaac
gccgtctcggtgtcgttctccaacctcggcgccaagcaccgcctcgccgcctggctcgac
gccctcgcgctcggtgccgggctgcccgacgagaactggacggtccacaccatcggcaag
caccgctcgggcggacaggtccagcaggtcgcgccgctcgcccagcacgaggccgagcag
tggctgcgcgacctcgtcgccctctacgacctcgggcagcgcgagccgctcccaatgccg
gtgaagacgtccctcgcgtgggccgaggagctgcgccgggtgcgcgccggcagcgacggc
gaccccgacgtgaaggcccgtgccgagtgggagacgccccgcttcaacgacgcggggttc
cccaaggaggacgccgacccgtggcacgtccgcgcgttcggcgagcacgccgacctcggg
ctcctggccgcaccaccgcggcccggcgaggacggcccgcaccgcctcggtcacttcgcg
tggcggctgtgggggccgctgatcgacggcggccacgcccaggtcagggggctgtga
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