Nocardioides okcheonensis: LN652_14510
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Entry
LN652_14510 CDS
T07822
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
noq
Nocardioides okcheonensis
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_14510
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LN652_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
AAA
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_30
ResIII
AAA_25
AAA_10
AAA_6
T2SSE
CbiA
Hydrolase
Zeta_toxin
3HCDH_N
Zot
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UFN43252
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Position
2978640..2980253
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AA seq
537 aa
AA seq
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MTETPEATPAPSGSTPGATDPISEAVAAGYRFDGPALELGGLMLDAETLGDARIRIPLAM
LNRHGLVAGATGTGKTKTLQLLAEQLSAQGVPVFAADIKGDLSGLGVAGEPSDKLSARTA
SVGQEWTATAFPTELYAIGGQGTGVPVRVTMSAFGPTLLAKVLDLNETQESSLGLVFYYC
DSHGLPLLDLADLRAVLQYLTADAAGKAELKTIGGLSPQTAGVILRELVAFEAQGADVFF
GEPEFDTKDFLRTTEDGRGIISLLELPNLQDRPALFSTFLMWLLADLFHDLPEEGDLDKP
KLVFFFDEAHLLFHDASDAFLDQVAQTVRLIRSKGVGVFFVTQSPTDVPDDVLAQLGSRV
QHQLRAHTPNDAKALKATVNTYPTSGYDDLAQVLTSLGIGEAVVTVMNERGAPTPVAWTR
LRAPESLMDAAPAEAMAAAVAASPLTPKYAEAIDRESARELLAKKLEEGARKAAEDARVQ
EMAREQKNERVTTASRKKAAKEQDSMVETVVKSTAFKDFMRTAAREIARGMFKSGRR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacggagacccccgaggccacgcccgccccctccgggagcacgcccggcgccaccgac
ccgatctccgaggcggtcgcggcgggctaccgcttcgacggcccggcgctcgagctgggc
gggctgatgctcgacgccgagacgctgggcgacgcccggatccggatcccgctcgccatg
ctcaaccggcacggtctggtcgccggcgccaccggcaccggcaagaccaagaccctccag
ctgctcgccgagcagctcagcgcccagggcgtcccggtgttcgccgccgacatcaagggc
gacctgtcgggcctgggcgtggcgggcgagccgagcgacaagctctccgcccgcaccgcg
agcgtcggacaggagtggaccgccaccgcgttccccaccgagctctacgcgatcggcggc
cagggcaccggcgtaccggtccgggtgacgatgagcgccttcggcccgacgctgctggcc
aaggtcctcgacctcaacgagacccaggagtcctcgctgggcctggtcttctactactgc
gactcccacgggctgccgctgctcgacctcgccgacctgcgcgcggtcctgcagtacctc
accgccgacgccgccgggaaggccgagctcaagacgatcggcgggctgtctccccagacc
gccggcgtcatcctgcgcgagctggtggcgttcgaggcgcagggcgccgacgtgttcttc
ggggagccggagttcgacaccaaggacttcctgcgcaccaccgaggacggccgcggcatc
atcagcctgctggagctgccgaacctgcaggaccgtcctgcgctgttctcgaccttcctc
atgtggctgctcgcggacctcttccacgacctgccggaggagggtgacctcgacaagccc
aagctggtcttcttcttcgacgaggcgcacctgctcttccacgacgcctccgacgccttc
ctcgaccaggtcgcccagaccgtccgcctgatccgctcgaagggcgtcggcgtcttcttc
gtgacccagtcgccgaccgacgtccccgacgacgtgctcgcccagctcggctcgcgcgtg
cagcaccagctccgcgcgcacacccccaacgacgccaaggcgctgaaggcgaccgtcaac
acctatcccacgagcggctacgacgacctcgcccaggtcctcaccagcctgggcatcggc
gaggccgtggtcaccgtgatgaacgagcgcggtgcgcccaccccggtcgcctggacccgc
ctgcgcgcccccgagtcgctgatggacgccgccccggccgaggcgatggccgccgcggtc
gccgcctcgcccctcaccccgaagtacgccgaggcgatcgaccgcgagtcggcccgcgag
ctgctcgcgaagaagctcgaggagggcgcgcgcaaggcggccgaggacgcccgggtgcag
gagatggcccgcgagcagaagaacgagcgggtcaccaccgcctcgcggaagaaggccgcg
aaggagcaggactcgatggtcgagacggtcgtgaagtcgaccgccttcaaggacttcatg
cggaccgccgcccgcgagatcgcgcgcgggatgttcaagagcggccggcggtag
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