KEGG   Nocardioides okcheonensis: LN652_16910
Entry
LN652_16910       CDS       T07822                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
noq  Nocardioides okcheonensis
Pathway
noq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:noq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LN652_16910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noq03400]
    LN652_16910
Enzymes [BR:noq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LN652_16910
DNA repair and recombination proteins [BR:noq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LN652_16910
 Prokaryotic type
     LN652_16910
SSDB
Motif
Pfam: UDG DUF4350
Other DBs
NCBI-ProteinID: UFN43706
LinkDB
Position
complement(3469047..3469772)
AA seq 241 aa
MSSLARLVEQGRVAPDWAEALAPVDEQIAAMGRFLRDEEAAGHGYQPSADRVFRAFERPL
ADVRVLVVGQDPYPNPSHPIGLSFAVERRVWPLPPSLLNIYVELRDDLGIVPPKHGDLSA
WADQGVMLLNRSLTVRPGDSNSHAGKGWESVTERAITALAERGGPLVAVLWGRHAQSLKP
LLGAVPAVESVHPSPLSARRGFFGSKPFSAVNRLLEEQGAEPVDWTLPAYDDVPERPAPR
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagctccctggcgcgcctggtggagcaggggcgggtcgcccccgactgggccgaggcg
ctggcgccggtcgacgagcagatcgcggcgatggggcgcttcctgcgcgacgaggaggcc
gccgggcacggctaccagccgtccgccgaccgggtgttccgcgccttcgagcgcccgctc
gccgacgtccgggtgctggtcgtggggcaggacccctacccgaacccgtcgcacccgatc
gggctcagcttcgccgtcgagcggcgcgtgtggccgctgccgccgagcctgctgaacatc
tacgtcgagctgcgcgacgacctcgggatcgtgcccccgaagcacggcgacctctcggcc
tgggccgaccagggcgtgatgctgctcaaccggtcgctcacggtgcgcccgggcgactcc
aacagccacgccggcaagggctgggagtcggtcaccgagcgcgccatcaccgccctggcc
gagcgcggcggacccctggtggccgtgctgtggggtcggcacgcacagtcgctgaagccg
ctgctgggagccgtgccggcggtcgagtcggtccacccctccccgctcagcgcgcggcgc
gggttcttcgggtcgaagccgttcagcgcggtcaaccggctgctcgaggagcagggtgcc
gagcccgtcgactggacgctgccggcctacgacgacgtccccgagcgcccggccccgcgg
cggtag

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