Nocardioides okcheonensis: LN652_17225
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Entry
LN652_17225 CDS
T07822
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
noq
Nocardioides okcheonensis
Pathway
noq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LN652_17225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_17225
Enzymes [BR:
noq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
LN652_17225
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LN652_17225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFN43766
LinkDB
All DBs
Position
3538183..3538770
Genome browser
AA seq
195 aa
AA seq
DB search
MGFTRAELESFRDTEVPDLLPAPGRPLRLLFVGINPGLWTAAVQTHFARPGNRFYPALLE
AGIIDRPVDPAAGMTDADREALRERGIGITNVVARATARADELTAEELRAGGERLRRLVA
EREPGVVAVAGITAYRTAFGERKAQVGEQPSPWGTSRVFVVPNPSGLNAHDTVATLAVAY
AGAARAAGLLPDARG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggattcaccagggcagagctggagtccttccgcgacaccgaggtccccgacctgctg
ccggcgcccggccggccgctgcggctgctcttcgtcggcatcaacccggggctgtggacc
gcggcggtccagacccacttcgcccgtcccggcaaccggttctacccggcgctgctggag
gccgggatcatcgaccggcccgtcgacccggcggccggcatgaccgacgccgaccgggag
gcgttgcgggagcgggggatcggcatcaccaacgtcgtcgcccgcgcgaccgcccgggcc
gacgagctcaccgccgaggagctgcgcgccggcggcgaacggctgcgccgcctggtcgcc
gagcgcgagccgggggtcgtcgcggtcgccggcatcaccgcctaccgcacggcgttcggc
gagcggaaggcgcaggtcggcgagcagccgtcgccgtggggaacctcgcgggtcttcgtc
gtgcccaacccgtcgggcctcaacgcccacgacacggtcgccaccctcgcggtggcctac
gccggtgcggcgcgggcggccgggttgctgccggacgcccgcggctga
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