Novosphingobium sp. EMRT-2: FA702_00635
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Entry
FA702_00635 CDS
T06038
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nor03016
]
FA702_00635
Enzymes [BR:
nor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FA702_00635
Transfer RNA biogenesis [BR:
nor03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FA702_00635
Prokaryotic type
FA702_00635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QCI92219
UniProt:
A0A4D7D8Z2
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All DBs
Position
115999..117087
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AA seq
362 aa
AA seq
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MHGAVKWGLGGAMLAGVLALAAFPAPIGLAMARLAIDARAGVDATRELPEGLHVALCGSG
SPLPDPTRAEPCSVVIAGKHVFVVDAGEGGARNMTLMRIPNGHVEAVFLTHLHSDHIDGL
GPMMLLRWTGANATVPLPIYGPAGTERVVAGMNEAYAIDGGYRTAHHGPAVAPPSGRGGT
AYPFALPPRGDGTPVTVLQRDGLTVTAFRVDHGPVDPAVGYRFDYKGRSIVFSGDTAPTP
LLVRNARGADLLVHEGLQPRLVGLMEQTLRKRGQPGLAKIMSDIPGYHTSPEAAAAEAQE
AGVKNLVFSHNVPQLPTRAMYPAYLGNARQKFDGTITVGEDGMVFSLPAGGKGMELRTWS
VR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcacggggcggtgaagtggggccttggtggagcgatgctggccggcgtgctggcgctg
gcggcatttccggcgccgatcggactggcaatggcacggctggcgatcgatgcgcgcgcc
ggcgtggatgcgacacgggaactgcccgaggggctgcatgtggcgctgtgcggctccggc
tccccgttgcccgatcccacccgcgccgagccgtgcagcgtggtgatcgccggcaagcat
gtcttcgtggtcgatgcgggtgagggcggcgcgcgcaacatgaccttgatgcgcattccc
aatgggcatgtcgaagcggtgttcctcacgcatctccattccgatcatatcgacgggctg
gggccgatgatgctgctgcgctggaccggggcgaacgccaccgtgccgctgccgatctac
gggccggcgggaaccgagcgcgtcgtggccgggatgaacgaggcctatgcgatcgacggg
ggctatcgcaccgcgcaccacggccccgctgtcgcgccgccgtcgggccggggcggcacc
gcctatcctttcgcgctgccgcccaggggggatggcacgcccgtcaccgtgttgcagcgg
gatggactcaccgtgaccgcgttccgcgtggatcacggcccggtcgacccggcggtgggc
tatcgcttcgactacaaggggcgctcgatcgtgttcagcggcgataccgcccccacgccg
ctgctggtgcgcaacgcgcgcggcgcggacctgctggtgcatgaagggttgcagcccagg
ctggtcggcctgatggagcagacgctgcgcaagcgcggacagccgggcctcgcaaagatc
atgagcgacatccccggttatcatacctcgccagaggccgctgcggccgaggcgcaggag
gccggcgtgaagaatctggtgttcagccacaacgtgccgcaattgcccacgcgcgcgatg
tatcccgcctatctcggcaacgcgcgccagaaattcgacggcacgatcacggtgggcgag
gacggcatggtgttcagcctgccggccggcggcaagggcatggaactgcgtacatggtcg
gtcagatga
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