Novosphingobium sp. EMRT-2: FA702_00695
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Entry
FA702_00695 CDS
T06038
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03420
Nucleotide excision repair
nor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FA702_00695
03430 Mismatch repair
FA702_00695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_00695
Enzymes [BR:
nor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FA702_00695
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FA702_00695
MMR (mismatch excision repair)
Other MMR factors
FA702_00695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
DUF3253
Motif
Other DBs
NCBI-ProteinID:
QCI95184
UniProt:
A0A4D7DFY2
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All DBs
Position
complement(126841..129138)
Genome browser
AA seq
765 aa
AA seq
DB search
MSVPQPANPADSEAWLDGLNPPQREAVLTTEGPVLMLAGAGTGKTAALTARMAYLLRARR
AWPSEILCVTFTNKAAREMRERVGQLIGPAVEGMPWLGTFHAIAAKMLRRHAEIVGLQSN
FTIIDTDDQLRLLKQLIQAEGLDEKRWPARQLAGLIDKWKNRGLNPADLDAGENEAYANG
RGQKFYALYQARLQALNACDFGDLLLHMLNVFRREREVLEQYQQRFKYVMVDEYQDTNAV
QYLWLRLIAQARKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIRLEQNYRSTPH
ILGAASGLIAENSERLGKTLWTEQNGGDKVRVVGVWDGPEEARRVGDEIERLEREGCGLN
QIAILVRAQFQTRELEDRFIQIGLGYRIVGGFRFYERAEIRDALAYLRLIASPSDDLAFE
RIYNTPKRGLGDKTLEKLHRHARARGVPLSLAAVEILDTDELPARARGTLTALMRDFARW
RDASKTLVPAELARTILDESGYTAALQAERSAEANGRLENLSELARAMEDYETLGDFLEH
VSLVMDNEAAPDDEKVTVMTIHAAKGLEFDQVFLPGWEEGVFPSQRALDEGGLASLEEER
RLAYVAITRARKRCTILHAANRRIYGQWTSSIPSRFIGELPRGHIEEETTLSGGASLWRA
NWSEQSDPFADVARAQPSRGVGRGPGWQRAAAQSYDPSPRRIPEATRSAASFAAKPRSDI
AMGARVFHDKFGYGTVAAQEGNKLEIDFETAGRKRMIDSFVKPAG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttccccaacccgcgaatcccgcagacagcgaagcctggctcgatggcctgaac
ccgccgcaacgcgaagccgtgctgaccaccgaaggccccgtgctgatgctggcgggcgcg
ggcaccggcaagaccgccgcgctcaccgcgcgcatggcctacctgctgcgcgcgcgccgg
gcgtggccctccgaaatcctctgcgtcacgttcaccaacaaggccgcgcgcgaaatgcgc
gaacgagtcggccaactgatcggccccgccgtggaagggatgccctggttgggcacgttc
catgccatcgcggcgaaaatgctgcgccgccatgcggaaatcgtcggtctgcaatcgaac
ttcacgatcatcgacaccgacgaccagttgcggctgctcaagcagctaatccaggcggaa
gggctggacgaaaagcgctggcccgcccggcagctcgcggggctgatcgacaagtggaag
aaccggggcctcaaccccgccgatctcgatgcgggcgagaacgaagcctatgccaacggg
cgcgggcagaagttctacgcgctttatcaggcgcggcttcaggcgctcaatgcctgcgac
tttggcgatctgctgctccacatgctcaacgtgttccggcgcgagcgcgaggtgctggaa
cagtaccagcagcgcttcaaatacgtgatggtggacgaataccaggataccaacgcggtg
cagtacctgtggctgcggctgatcgcgcaggcgcgcaagaacatctgcgtggtgggagac
gacgaccagtcgatctattcctggcgtggcgcggaagtggccaacatcctgcgcttcgaa
aaggacttccccggcgcgaaggtgatccggctggagcagaactaccgctccaccccgcac
atcctgggcgcggcatccggcttgatcgcggaaaattccgaacggctcggcaagacgctg
tggaccgagcagaatggcggtgacaaggttcgcgtcgtgggcgtgtgggacgggccagag
gaagcccgccgcgtgggcgacgagatcgagcgcctggaacgcgaaggctgcgggctcaac
cagatcgcgattctggtgcgcgcgcagttccagacgcgcgaactggaagaccgcttcatc
cagatcggcctgggctatcgcatcgtcggcggcttccgcttctacgaacgcgccgaaatc
cgtgatgcgctcgcctatctgcgcctgatcgcctcaccatcggacgacctcgcgttcgag
cggatctacaacacgcccaagcgggggctgggtgacaagacgctggagaagctccaccgc
catgcccgcgcgcgcggcgtgccgctgtcgctggcggcggtcgaaatcctcgataccgat
gaactgcccgcccgcgcgcgcggcacgctgaccgcgctgatgcgcgatttcgcgcgctgg
cgcgatgcctcgaaaacgctcgtgccagcggaactcgcgcgcaccatcctcgatgagagc
ggctacaccgccgcgcttcaggccgaacgcagtgcggaggcgaacgggcggctggaaaac
ctctccgaactcgcccgcgcgatggaggattacgagacgctgggcgatttcctggaacac
gtcagcctcgtgatggacaacgaagccgcgcccgatgacgagaaggtcacggtgatgacg
atccacgccgccaaggggctggagttcgatcaggtgttcctgccgggctgggaggaaggc
gtgttcccctcgcaacgcgcgctcgatgaaggcggccttgcctcgctggaagaggaacgc
cggctcgcctacgtcgccatcacccgcgcgcgcaaacgctgcacaatcctgcacgccgcc
aaccgccgcatctatggccagtggaccagctcgattcccagccgcttcatcggcgaactg
ccgcgcgggcacatcgaggaagaaaccacgctgtccggcggcgcctcgctatggcgcgca
aactggtccgaacagagcgatcccttcgccgacgtcgcgcgtgcgcaaccgtcgcgcggc
gtgggccgcggccccggctggcagcgcgcggcggcgcagagctatgaccccagcccccgc
cgcattcccgaagccacccgcagcgccgccagcttcgccgccaagccccgctccgacatc
gccatgggcgcgcgcgtgttccacgacaagttcggctacggcaccgtcgccgcgcaggaa
ggcaacaagctggagatcgatttcgaaacggcgggccgcaagcgcatgatcgacagcttc
gtcaagccggcggggtag
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