KEGG   Novosphingobium sp. EMRT-2: FA702_01780
Entry
FA702_01780       CDS       T06038                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
nor  Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:nor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nor03032]
    FA702_01780
   03036 Chromosome and associated proteins [BR:nor03036]
    FA702_01780
   03400 DNA repair and recombination proteins [BR:nor03400]
    FA702_01780
DNA replication proteins [BR:nor03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FA702_01780
Chromosome and associated proteins [BR:nor03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FA702_01780
DNA repair and recombination proteins [BR:nor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FA702_01780
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG Phage_cement_2 DUF7619 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: QCI92414
UniProt: A0A4D7DAQ7
LinkDB
Position
331412..331687
AA seq 91 aa
MNNSELVDIIATSHDMTKTDAKKIVDSVFGAIADAAAKGDEVALNGFGKFKVKHTPAREG
RSPATGETIKIAASKKLAFSAAKAVKDRLNG
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaattccgaactcgtcgatatcattgccaccagccatgacatgacgaagaccgac
gcgaagaagatcgtcgattccgtgttcggtgccatcgccgacgctgccgccaagggcgac
gaagttgcattgaatggattcggcaaattcaaggtaaagcatacgccggcccgcgaaggc
cgcagtccggcgacaggcgaaacgatcaagattgctgcgtcgaagaagctggctttctcg
gcagccaaggcggtcaaggatcggcttaacggctga

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